Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636362
Identifier: 121636362
GI number: 121636362
Start: 567319
End: 567984
Strand: Reverse
Name: 121636362
Synonym: BCG_0487c
Alternate gene names: NA
Gene position: 567984-567319 (Counterclockwise)
Preceding gene: 121636363
Following gene: 121636361
Centisome position: 12.98
GC content: 64.41
Gene sequence:
>666_bases GTGCACCACTCGTTCGCATACCGCAGCTACAGCTGGTACGTGGATGTCGACAACCTCCCCCAGCTGCCCTGGTGGCTGCG ACCGTTCGCACGGTTCCACGCCGACGACCACTTCGCTGACCCGTTCTCGTGTCCGCCGCATAGCTCGCTGCGTGACCGGC TGGACGCCTTCTTTGCCGCTCGCGGCCTTGCCGTCCCCGACGGCCGTATCACCGCGCTGCTGCAAGCACGCGTTCTCGGC TATGTCTTCAACCCGTTGAGCATCTTCTGGTGCCACGACCGCGACGGCCAACTGCGCCATGTCATTGCCGAGGTGCACAA CACCTACGGCGGACGCCATGCTTACCTGCTACCGCCGGCCGACCTGCCCGTGGTGACGGCCAAGAACTTCTACGTTTCGC CGTTTCATCAGCTAGCCGGCTACTACCTGATACGGGCACCACGGCCCGACCGCGAACTCGACGTCACGGTGACGCTGCAC CGTGACCGCCGGCAGGTGTGCCCGGAATTCACAGCCACCCTGCGTGGGCAGCGGCGACCGGCAACGACAAGACAGATCGC GATGATGCAAATCATTTCACCGCTGGCGCCGATGGTGGTGGCCGCGCGCATCAGGATACAGGGGATCAGACTGTGGCTAC GTCGAGTTCCGGTGGTGCCGCGATGA
Upstream 100 bases:
>100_bases GGCCGGCAGCGATCCCACAGGAGGCGATGGTCGCGTGCTGACTCAAACCCTGACGCCGGCGATCTACCGCACCACGATCA GCCACTGCAGACAAGTCCCG
Downstream 100 bases:
>100_bases CCGTCGAAACCAGCCAGACACCGTCGGCAGCAATCGATTCGGATCGCTGGCCAGCGGTTGCCAAGGTGCCGCGCGGTCCC CTAGCCGCGGCATCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLG YVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLH RDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR
Sequences:
>Translated_221_residues MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLG YVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLH RDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR >Mature_221_residues MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLG YVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPADLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLH RDRRQVCPEFTATLRGQRRPATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25599; Mature: 25599
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAA CCCCEEECEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH RGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPA CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCC DLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRP CCCEEEECCCEECCHHHHCCEEEEECCCCCCEEEEEEEEECCHHHHCHHHHHHHCCCCCC ATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHFADPFSCPPHSSLRDRLDAFFAA CCCCEEECEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH RGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQLRHVIAEVHNTYGGRHAYLLPPA CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCC DLPVVTAKNFYVSPFHQLAGYYLIRAPRPDRELDVTVTLHRDRRQVCPEFTATLRGQRRP CCCEEEECCCEECCHHHHCCEEEEECCCCCCEEEEEEEEECCHHHHCHHHHHHHCCCCCC ATTRQIAMMQIISPLAPMVVAARIRIQGIRLWLRRVPVVPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA