Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is mmpL1a [H]
Identifier: 121636315
GI number: 121636315
Start: 512270
End: 514045
Strand: Reverse
Name: mmpL1a [H]
Synonym: BCG_0440c
Alternate gene names: 121636315
Gene position: 514045-512270 (Counterclockwise)
Preceding gene: 121636316
Following gene: 121636314
Centisome position: 11.75
GC content: 60.42
Gene sequence:
>1776_bases GTGAGGAGCCAACGTCTAGCCGGGCACCTGTCGGCCGCCGCCCGGACGATCCATGCGTTGTCGCTACCCATCATTCTGTT CTGGGTGGCGCTGACTATTGTGGTGAACGTCGTTGCGCCGCAGCTACAGTCGGTCGCTAGGACACATTCGGTGGCGTTAG GCCCCCACGATGCTCCGTCACTGATCGCCATGAAGCGCATCGGCAAGGACTTTCAGCAATTCGATTCTGACACCACTGCA ATGGTGCTGCTGGAGGGCCAAGAGAAGCTGGGTGATGAGGCGCACCGCTTCTATGACGTGCTAGTGACCAAGCTGTCACA AGACACCACCCACGTCCAACACATTGAGAACTTCTGGGGCGATCCGCTGACCGCGGCGGGATCGCAGAGCGCTGACGGCA AGGCAGCATATGTCCAGCTGAACCTCACTGGTGATCAGGGCGGCTCGCAGGCCAACGAGTCTGTCGCCGCCGTGCAACGC ATCGTGGACAGCGTGCCACCGCCGCCGGGGATCAAGGCTTACGTGACAGGCCCGGGTCCACTCGGCGCCGATCGAGTTGT ATACGGCGACCGCAGCCTTCACACGATTACCGGCATCAGCATTGCGGTGATCGCGATCATGTTGTTCATCGCCTACCGCT CGCTTTCTGCTGCTCTGATCATGCTGCTGACGGTCGGGCTCGAGCTGCTGGCGGTCCGCGGCATCATCTCCACTTTTGCC GTCAACGACCTCATGGGCCTGTCTACATTCACTGTCAACGTGTTGGTGGCGCTCACGATCGCGGCTTCGACGGACTACAT CATCTTTCTCGTCGGACGCTATCAAGAGGCACGTGCGACTGGCCAGAACCGAGAAGCCGCTTACTACACCATGTTTGGTG GGACGGCACACGTGGTCCTGGCATCTGGCCTCACCGTCGCCGGCGCCATGTACTGCCTCGGCTTTACCCGGCTACCCTAC TTCAATACCCTCGCATCGCCATGCGCGATCGGTTTGGTCACGGTGATGTTGGCGTCTCTGACGCTGGCGCCCGCGATCAT CGCCGTTGCCAGCCGATTCGGGCTATTCGACCCCAAACGAGCGACAACGAAACGGCGTTGGCGCCGGATCGGCACGGTCG TCGTGCGATGGCCCGGCCCCGTCTTGGCCGCCACCCTGCTGATAGCGCTGATCGGACTGCTCGCCTTGCCGAAATACCAG ACCAACTACAACGAGCGCTACTACATCCCCAGCGCGGCGCCATCCAACATCGGTTACCTCGCATCAGACCGTCACTTTCC GCAAGCCCGCATGGAACCGGAGGTCCTGATGGTCGAGGCCGATCACGACCTGCGTAACCCGACCGACATGCCCATCCTGG ACAGGATCGCCAAAACCGTCTTCCATACGCCGGGGATCGCGCGGGTGCAAAGCATTACCAGACCGTTGGGGGCTCCGATC GACCACTCGTCGATCCCGTTTCAGCTCGGCATGCAAAGCACGATGACCATCGAAAACCTGCAGAACCTCAAGGACCGCGT GGCTGATCTATCCACCCTTACCGATCAACTGCAACGCATGATCGACATCACCCAGCGAACCCAGGAGCTGACGCGACAGC TAACCGATGCCACCCATGATATGAACGCTCATACCAGGCAGATGCGAGACAACGCCAACGAACTACGCGATCGAATCGCC GATTTCGACGACTTCTGGCGCCCCTCAGAAGTTTCACGTACTGGGAGCGCCACTGCTTCGACATTCCCATCTGCTGGTCG ATGCGCTCCTTGTTGA
Upstream 100 bases:
>100_bases GTGCAAGCCTGGGCTGTCGCATCACTGTCAACGAGGTGATCCGCGAGGAGCGCATTGTGAATGCTTACCACGCGCACACC AGTTGCCTGGTGAAATCCGC
Downstream 100 bases:
>100_bases ACAGCATGGATAACGTCGACAAGCTCACCGAGGACCTTGCCAACCTCACCGACGACACCGAACGCATGGACACCACACAG CGGCAACTACTCGCCCAACT
Product: putative transmembrane transport protein mmpL1a
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSVARTHSVALGPHDAPSLIAMKRIGKDFQQFDSDTTA MVLLEGQEKLGDEAHRFYDVLVTKLSQDTTHVQHIENFWGDPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQR IVDSVPPPPGIKAYVTGPGPLGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFA VNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVLASGLTVAGAMYCLGFTRLPY FNTLASPCAIGLVTVMLASLTLAPAIIAVASRFGLFDPKRATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKYQ TNYNERYYIPSAAPSNIGYLASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAKTVFHTPGIARVQSITRPLGAPI DHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA DFDDFWRPSEVSRTGSATASTFPSAGRCAPC
Sequences:
>Translated_591_residues MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSVARTHSVALGPHDAPSLIAMKRIGKDFQQFDSDTTA MVLLEGQEKLGDEAHRFYDVLVTKLSQDTTHVQHIENFWGDPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQR IVDSVPPPPGIKAYVTGPGPLGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFA VNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVLASGLTVAGAMYCLGFTRLPY FNTLASPCAIGLVTVMLASLTLAPAIIAVASRFGLFDPKRATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKYQ TNYNERYYIPSAAPSNIGYLASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAKTVFHTPGIARVQSITRPLGAPI DHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA DFDDFWRPSEVSRTGSATASTFPSAGRCAPC >Mature_591_residues MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSVARTHSVALGPHDAPSLIAMKRIGKDFQQFDSDTTA MVLLEGQEKLGDEAHRFYDVLVTKLSQDTTHVQHIENFWGDPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQR IVDSVPPPPGIKAYVTGPGPLGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFA VNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVLASGLTVAGAMYCLGFTRLPY FNTLASPCAIGLVTVMLASLTLAPAIIAVASRFGLFDPKRATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKYQ TNYNERYYIPSAAPSNIGYLASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAKTVFHTPGIARVQSITRPLGAPI DHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHDMNAHTRQMRDNANELRDRIA DFDDFWRPSEVSRTGSATASTFPSAGRCAPC
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 64260; Mature: 64260
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSVARTHSVALGPHDAPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH LIAMKRIGKDFQQFDSDTTAMVLLEGQEKLGDEAHRFYDVLVTKLSQDTTHVQHIENFWG HHHHHHHHHHHHHHCCCCEEEEEECCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQRIVDSVPPPPGIKAYVTGPGP CCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC LGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFA CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVL HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCEEHHH ASGLTVAGAMYCLGFTRLPYFNTLASPCAIGLVTVMLASLTLAPAIIAVASRFGLFDPKR HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKYQTNYNERYYIPSAAPSNIGYL HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC ASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAKTVFHTPGIARVQSITRPLGAPI CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC DHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHD CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MNAHTRQMRDNANELRDRIADFDDFWRPSEVSRTGSATASTFPSAGRCAPC CHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSQRLAGHLSAAARTIHALSLPIILFWVALTIVVNVVAPQLQSVARTHSVALGPHDAPS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH LIAMKRIGKDFQQFDSDTTAMVLLEGQEKLGDEAHRFYDVLVTKLSQDTTHVQHIENFWG HHHHHHHHHHHHHHCCCCEEEEEECCHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DPLTAAGSQSADGKAAYVQLNLTGDQGGSQANESVAAVQRIVDSVPPPPGIKAYVTGPGP CCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC LGADRVVYGDRSLHTITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFA CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNDLMGLSTFTVNVLVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVL HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCCCCEEEEEECCCEEHHH ASGLTVAGAMYCLGFTRLPYFNTLASPCAIGLVTVMLASLTLAPAIIAVASRFGLFDPKR HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ATTKRRWRRIGTVVVRWPGPVLAATLLIALIGLLALPKYQTNYNERYYIPSAAPSNIGYL HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCC ASDRHFPQARMEPEVLMVEADHDLRNPTDMPILDRIAKTVFHTPGIARVQSITRPLGAPI CCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC DHSSIPFQLGMQSTMTIENLQNLKDRVADLSTLTDQLQRMIDITQRTQELTRQLTDATHD CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MNAHTRQMRDNANELRDRIADFDDFWRPSEVSRTGSATASTFPSAGRCAPC CHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]