Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is lprO
Identifier: 121636091
GI number: 121636091
Start: 239602
End: 240711
Strand: Reverse
Name: lprO
Synonym: BCG_0216c
Alternate gene names: NA
Gene position: 240711-239602 (Counterclockwise)
Preceding gene: 121636092
Following gene: 121636077
Centisome position: 5.5
GC content: 64.14
Gene sequence:
>1110_bases ATGTGGATTCGGGCCGAGAGGGTTGCTGTGCTGACACCGACTGCCAGCCTGCGCCGATTGACGGCTTGCTACGCCGCGTT GGCGGTGTGCGCCGCCCTCGCCTGCACCACCGGGCAGCCGGCCGCCCGCGCCGCCGACGGGCGCGAGATGCTCGCCCAAG CGATAGCCACCACCAGGGGCTCATACCTGGTGTACAACTTCGGCGGCGGTCATCCTATGCCGCTGCTCAACGCAGGTGGT CACTGGTACGAGATGAACAACGGCGGCCATCTGATGATCATCAAGAATGCCTCCCAACGGCTTTCACCACATCTACTGGT AGACACCCACACTGGAGACCAGGCGCGCTGCGAACACAACCCAGGTGCTCACACCGGTGAAGGCTTGTGGCAAGCCTCCG AGATCTACCCGCCGCTTAAGGCGTGGCAGCGTATGGGGCGACCCACCATTGCGGTCAACGCCAACTTCTTCGACGTTCGC GGACAAAAGGGGGGCAGCTGGCGGTCGACCGGCTGCAGCTCACCGCTGGGCGCCTACGTGGACAACACCCGCGGACAAGG ACGCGCCAACCAAGCGGTCACCGGCACCGTCGCCTACGCCGGAAAGCAGGGCCTTTCCGGAGGAAATGAGTTGTGGAGCT CGCTGACGACGATGATCCTTCCGGTCGGTGGTGCACCGTATGTTTTGCGGCCCAAAAGCAGACAGGACTACGATCTTGCC ACTCCGGTGATCGAGGACTTGCTCAACAAGAATGCACGGTTCGTCGCCGTGGCCGGAATCGGGCTGTTATCCCCCGGCAA TACCGGCCAGCTCCACGACGGCGGTCCCAGCGCCGCGCGAACGGCGCTTGCCTATGCGAAGCAGAAGGACGAGATGTACA TCTTCCAGGGCGGCAACTACACCCCGGACAACATCCAAGACCTGTTCCGCGGCCTGGGTAGTGACACCGCGATTCTGCTC GACGGCGGGGGGTCATCGGCGATCGTTCTGCGCCGTGATACCGGGGGCATGTGGGCCGGCGCTGGGTCGCCGAAAGGATC GTGCGACACCCGTCAGGTGCTCTGTGACTCCCATGAGCGGGCGCTGCCCAGCTGGCTGGCGTTCAACTAA
Upstream 100 bases:
>100_bases AGCTCAAGCGAACAACCGTAATTCGAACGCGGCCGAACCGTCACGCAGCTGTTACTGAAGTTGACAGTGTGATCAGTGTG CCTAATGCTGGGATGGTTGC
Downstream 100 bases:
>100_bases GGCTTCGCAGCGCCGGCGGGCTCGGTCCCGCTACACCTGCGGCGTCAAATCCAGCGAGGTGATGGTCGTCATCCTGGTCA CCAGCCACCGCGCGTCATAA
Product: putative lipoprotein lprO
Products: NA
Alternate protein names: LprO Protein; Lipoprotein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGG HWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVR GQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLA TPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILL DGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN
Sequences:
>Translated_369_residues MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGG HWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVR GQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLA TPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILL DGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN >Mature_369_residues MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGG HWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVR GQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLA TPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILL DGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39142; Mature: 39142
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRG CCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCC SYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHN CEEEEECCCCCCCCEECCCCCEEEECCCCEEEEECCCHHHCCCEEEEECCCCCCCCCCCC PGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYV CCCCCCCCCCCHHHCCCCHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCHHH DNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLA CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEECCCCCCCCCHH TPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNY HHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC TPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHER CCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCHHH ALPSWLAFN CCCHHHCCC >Mature Secondary Structure MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRG CCEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCC SYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHN CEEEEECCCCCCCCEECCCCCEEEECCCCEEEEECCCHHHCCCEEEEECCCCCCCCCCCC PGAHTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYV CCCCCCCCCCCHHHCCCCHHHHHHCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCHHH DNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLA CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEECCCCCCCCCHH TPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNY HHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC TPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHER CCHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHCCHHH ALPSWLAFN CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA