Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120613027
Identifier: 120613027
GI number: 120613027
Start: 4881477
End: 4881959
Strand: Reverse
Name: 120613027
Synonym: Aave_4391
Alternate gene names: NA
Gene position: 4881959-4881477 (Counterclockwise)
Preceding gene: 120613028
Following gene: 120613026
Centisome position: 91.2
GC content: 71.43
Gene sequence:
>483_bases ATGGCCTCTCTCAATGCCTTCCTGGTCGCCGTCGAGATGGCGGAGCGCCAGCGGGACGCCGCGCGCCAGGCCCTGCAGGA CCTTCAGCGCGCCCGGAGCGCGTCCGAAGCGCAACTGCAGCAGCTTCAAGGGTACGCGCACGAGACGGAAGGGCGCTGGG GCATGCGCGCCGACGCCACGGTCAAGCCGGAGGTCATGTACCACCACTACCAGTTCATGGACCGCCTCGGGCATGCCATG GGCGTGCAGAGCAGCGTGATCGGCGAGCAGGAAGGCCGCGTACGTGCCGCGAGCCAGGCCCTGCTGCAGGCCGAGCTGCG CGTCGCGGCGCTGCGCAAGGTGGTGGAGCGGCGGCGCCACGACCTGGCCCAGGCCGAGGCGCGGCGGGAGCAGAAACAGA CGGACGAGCGCGCCGCGCTGCGTTTCGGAAAGGCCCCGGTCACGGGGCAGGGCCCTGGCGGGCCAGAGGAGCCATCATCA TGA
Upstream 100 bases:
>100_bases CTGCAGCAGAACATGTTCGAGGCCGCGCCCATGCAGGACAGCCTGCACGCCATGGCGGCCGTACTGGGCCCGCAGGCCTG ACCCGGGGAGCGGCACTGCC
Downstream 100 bases:
>100_bases CCAACGACATCCAGAACCGCACGGCCCGCGCGCCGTCTTCGGCCCACGCAACCCACGAATCGCGGGGCGCGCGGGGCGCC GGCAAGGCCGGCAACGCAAC
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: Flagellar Export Protein Flij; Flagellar Export FliJ
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MASLNAFLVAVEMAERQRDAARQALQDLQRARSASEAQLQQLQGYAHETEGRWGMRADATVKPEVMYHHYQFMDRLGHAM GVQSSVIGEQEGRVRAASQALLQAELRVAALRKVVERRRHDLAQAEARREQKQTDERAALRFGKAPVTGQGPGGPEEPSS
Sequences:
>Translated_160_residues MASLNAFLVAVEMAERQRDAARQALQDLQRARSASEAQLQQLQGYAHETEGRWGMRADATVKPEVMYHHYQFMDRLGHAM GVQSSVIGEQEGRVRAASQALLQAELRVAALRKVVERRRHDLAQAEARREQKQTDERAALRFGKAPVTGQGPGGPEEPSS >Mature_159_residues ASLNAFLVAVEMAERQRDAARQALQDLQRARSASEAQLQQLQGYAHETEGRWGMRADATVKPEVMYHHYQFMDRLGHAMG VQSSVIGEQEGRVRAASQALLQAELRVAALRKVVERRRHDLAQAEARREQKQTDERAALRFGKAPVTGQGPGGPEEPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17802; Mature: 17671
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLNAFLVAVEMAERQRDAARQALQDLQRARSASEAQLQQLQGYAHETEGRWGMRADAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC VKPEVMYHHYQFMDRLGHAMGVQSSVIGEQEGRVRAASQALLQAELRVAALRKVVERRRH CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLAQAEARREQKQTDERAALRFGKAPVTGQGPGGPEEPSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ASLNAFLVAVEMAERQRDAARQALQDLQRARSASEAQLQQLQGYAHETEGRWGMRADAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC VKPEVMYHHYQFMDRLGHAMGVQSSVIGEQEGRVRAASQALLQAELRVAALRKVVERRRH CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLAQAEARREQKQTDERAALRFGKAPVTGQGPGGPEEPSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA