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The map label for this gene is ybbI [C]

Identifier: 120613008

GI number: 120613008

Start: 4858624

End: 4859037

Strand: Reverse

Name: ybbI [C]

Synonym: Aave_4372

Alternate gene names: 120613008

Gene position: 4859037-4858624 (Counterclockwise)

Preceding gene: 120613010

Following gene: 120613007

Centisome position: 90.78

GC content: 63.29

Gene sequence:

>414_bases
ATGGCTGTCACCTACACCATCAGCGATCTCGCCAAAGAGTTCGACCTCACGACACGTGCGATGCGCTTCTACGAAGACAT
GGGCCTGCTCCAGCCCGAGCGTTCCGGCCCTGGGGGGCGCACCCGCATCTACTCTGCCCGGGACCGCACGCGATTGCGAT
TGACGCTGCGTGCGAAGCGTCTGGGCCTTTCGCTGGCCGACGCGAAGTCCATCATCGACCTGTATGACAGCCCCAGGGAC
ACGGGGGTGCAGCTGCGGAAGTTCCTGGATGTGCTGGCGAGCCATCGGCAGCAGCTGGAGGAGCAGATGGCGGACCTGCA
GGCCAACCTCGACGAGATCCGGGAACACGAAAGGGAGGCGCGCTCGCTGCTCTCCAAGGTGGAGAAATCCAGCAAAGGCC
GGAATGCTCCATAA

Upstream 100 bases:

>100_bases
CGCAATGGGTTATGGCACGGCTACGGTACGATTGACGTGCGCGTCAACGTGAGGCGATGCGCGGCTTCCTGCCTACCCCA
CATTCCTGCTGTCCCTGTCC

Downstream 100 bases:

>100_bases
TTGACGTTTACGTAAACGTAATGACGCCTGCCATGCTGCACGCCTAGGCCGTGTAGACACGCCGAAGGCAGTCTTGCCAC
CCCTTCAAGGAGACAACCCC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR-Family Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; MerR Family Regulatory Family; Transcription Regulator Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAVTYTISDLAKEFDLTTRAMRFYEDMGLLQPERSGPGGRTRIYSARDRTRLRLTLRAKRLGLSLADAKSIIDLYDSPRD
TGVQLRKFLDVLASHRQQLEEQMADLQANLDEIREHEREARSLLSKVEKSSKGRNAP

Sequences:

>Translated_137_residues
MAVTYTISDLAKEFDLTTRAMRFYEDMGLLQPERSGPGGRTRIYSARDRTRLRLTLRAKRLGLSLADAKSIIDLYDSPRD
TGVQLRKFLDVLASHRQQLEEQMADLQANLDEIREHEREARSLLSKVEKSSKGRNAP
>Mature_136_residues
AVTYTISDLAKEFDLTTRAMRFYEDMGLLQPERSGPGGRTRIYSARDRTRLRLTLRAKRLGLSLADAKSIIDLYDSPRDT
GVQLRKFLDVLASHRQQLEEQMADLQANLDEIREHEREARSLLSKVEKSSKGRNAP

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15694; Mature: 15563

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTYTISDLAKEFDLTTRAMRFYEDMGLLQPERSGPGGRTRIYSARDRTRLRLTLRAKR
CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
LGLSLADAKSIIDLYDSPRDTGVQLRKFLDVLASHRQQLEEQMADLQANLDEIREHEREA
HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RSLLSKVEKSSKGRNAP
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVTYTISDLAKEFDLTTRAMRFYEDMGLLQPERSGPGGRTRIYSARDRTRLRLTLRAKR
EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
LGLSLADAKSIIDLYDSPRDTGVQLRKFLDVLASHRQQLEEQMADLQANLDEIREHEREA
HCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RSLLSKVEKSSKGRNAP
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA