Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612988
Identifier: 120612988
GI number: 120612988
Start: 4834784
End: 4835392
Strand: Reverse
Name: 120612988
Synonym: Aave_4352
Alternate gene names: NA
Gene position: 4835392-4834784 (Counterclockwise)
Preceding gene: 120612989
Following gene: 120612987
Centisome position: 90.33
GC content: 72.58
Gene sequence:
>609_bases ATGCCGGGCCTGCTGGCGCTCGCCGCGGGGCTCGGCTGGGCCAGCGGCTTCCGGCTCTACGCGGTGGTTTTCCTCGTCGG CGCGATGGGCGCGGGCGGCTGGCTGGCGCTGCCGGAGGGGCTGCGCATGCTGCAGCACCCGGCCGTGCTGCTGGTGAGCG GGCTGCTGCTGTGCGTGGAGTTCGTCGCCGACAAGGTGCCCTGGTTCGACAACCTGTGGGACGCCGCGCATGCCGTGATC CGCGTGCCCGCGGGCGCCCTGCTGGCCGCTGGCGTGTTCGGCCCGGACAACGGCGGCATGGCGCTGGCGGCCGGCCTGCT GGGCGGCTCGCTGTCCGCCACGGCGCTGGCCACCAAGATGACCGCGCGGGCTGCCGTCAACACGTCGCCGGAGCCCGTGT CGAACTGGCTGCTGTCGTTTTTCGAGGACGGCCTGGTCGTGGTGGTGGTCTGGCTGGCCACGCAGCATCCGTTCGCCTTC GGCATCGCGCTGGCCTGCATGGTGGCGCTGTCGGTGCTGGTGCTGGTGGTGCTGCTGAAGTTCCTGCGCGCCGTGCTGCG GCGGCTCTCGGCTTTCTTTTCCCGGCCTGCGGCCCCGGCCACGAGATGA
Upstream 100 bases:
>100_bases GCACATCGTCCAGTGGCTGCACGCCGCCGGCCTGCACGTGGATGCGGGCACGGCCCAGGCCGTGGCGGAGCAGGCCCGCC GCGCCACGGGCGTGCTGGAC
Downstream 100 bases:
>100_bases GTGCGGGCGGCCTGATTTTGGAGTGAGACGCAAAGTGTTTGACAAGATCCTGATTGCCAACCGCGGGGAAAACGCCTGCC GGGCAGGCGTTTCCGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPGLLALAAGLGWASGFRLYAVVFLVGAMGAGGWLALPEGLRMLQHPAVLLVSGLLLCVEFVADKVPWFDNLWDAAHAVI RVPAGALLAAGVFGPDNGGMALAAGLLGGSLSATALATKMTARAAVNTSPEPVSNWLLSFFEDGLVVVVVWLATQHPFAF GIALACMVALSVLVLVVLLKFLRAVLRRLSAFFSRPAAPATR
Sequences:
>Translated_202_residues MPGLLALAAGLGWASGFRLYAVVFLVGAMGAGGWLALPEGLRMLQHPAVLLVSGLLLCVEFVADKVPWFDNLWDAAHAVI RVPAGALLAAGVFGPDNGGMALAAGLLGGSLSATALATKMTARAAVNTSPEPVSNWLLSFFEDGLVVVVVWLATQHPFAF GIALACMVALSVLVLVVLLKFLRAVLRRLSAFFSRPAAPATR >Mature_201_residues PGLLALAAGLGWASGFRLYAVVFLVGAMGAGGWLALPEGLRMLQHPAVLLVSGLLLCVEFVADKVPWFDNLWDAAHAVIR VPAGALLAAGVFGPDNGGMALAAGLLGGSLSATALATKMTARAAVNTSPEPVSNWLLSFFEDGLVVVVVWLATQHPFAFG IALACMVALSVLVLVVLLKFLRAVLRRLSAFFSRPAAPATR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20989; Mature: 20858
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLLALAAGLGWASGFRLYAVVFLVGAMGAGGWLALPEGLRMLQHPAVLLVSGLLLCVE CCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH FVADKVPWFDNLWDAAHAVIRVPAGALLAAGVFGPDNGGMALAAGLLGGSLSATALATKM HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH TARAAVNTSPEPVSNWLLSFFEDGLVVVVVWLATQHPFAFGIALACMVALSVLVLVVLLK HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FLRAVLRRLSAFFSRPAAPATR HHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PGLLALAAGLGWASGFRLYAVVFLVGAMGAGGWLALPEGLRMLQHPAVLLVSGLLLCVE CHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH FVADKVPWFDNLWDAAHAVIRVPAGALLAAGVFGPDNGGMALAAGLLGGSLSATALATKM HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH TARAAVNTSPEPVSNWLLSFFEDGLVVVVVWLATQHPFAFGIALACMVALSVLVLVVLLK HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FLRAVLRRLSAFFSRPAAPATR HHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA