Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612968
Identifier: 120612968
GI number: 120612968
Start: 4809558
End: 4810625
Strand: Reverse
Name: 120612968
Synonym: Aave_4332
Alternate gene names: NA
Gene position: 4810625-4809558 (Counterclockwise)
Preceding gene: 120612969
Following gene: 120612967
Centisome position: 89.87
GC content: 70.22
Gene sequence:
>1068_bases ATGAGCTGGCGCAACCGGCTGGAGCCGGAGTCGCTCGTGGCGCATGCCGGCGCGCATCCGCCGGAAGGGTTCGCCTGGCT GCAGGGACTGCCGGTGCCGGTGTTCTCGGCGCCGTTCGACCTGCTGACGACTGCGGACGACGAGTTCAAGGCGCGGTTGC GCGGCTGGCCGCTGTTCGAGCGCTGGTCGCGGTGGCTGCGCGTGCGCACGGCCTTCGCGGGCACCACGGTGACGGAGTAC GCCCCGCTGCCGCGGGGCGCGGTGCCGGAGGCGGTCGCCACGGCGCTGCGCACAGGGCCGGGCCGTGATTTCGCGCTGGT GATCGCGAAGGATCTTCCGCAGGATTCGCCGCTGCTGGCCCCGGAGGACAACGCCTACGCCCAGGCGCTGGCCGAGGCCT GCGTGCGGCAGGGCTTCGTGCTGGTGGAGGGCCAGGCGCTGGCCTATGTGCCGATCGACTTCGGCAACCTGGACGAGTAC CTGGCGCGCCTGTCCTCCAGCCGCCGCAGCAACCTGCGGCGCAAGCTGCGCAGCCGGTCGCAGCTGCGGACAGAGCGCGT GCCCACGGGCGATGCCTATGCCGACGACGCGCGGGTGGATGCCTGCTACGCGCTCTACGAGGCCGTGCATGCGCAGAGCG AGGTGCATTTCGACCGGCTGACCCGGGATTTCTTCGCCGCGGTGCTGCGCGATGGCGGCAGCGGCGGCATCGTCTTCGAG TACCGGCACGGCGGCACCGGCGCGCTGCTGGGCTGGAACCTCTGCTACGAGCACGCAGGGCGCCTCGTGGACAAGTACAT CGGCCTGTCCTACCCCGCCGCGCGCGAGGTCAATCTATATTTCGTGAGCTGGATGGTCAATCTGGAATATGCGGTCGAAC GGGGCCTGACCCACTACATCGCGGGCTGGACCGACCCCGAGGTCAAGCGCAGCCTGGGCGCGAGTTTCACCTGGACGCGG CACGCCGTCTATGTGCGCAACCCGTTGCTGCGCGCGCTGGCCCGTCGTTTCTCGGGCCATTTCGAGAGCGACCGGCGCTG GAAGGACAGCGTGGAGGACGCGGCATGA
Upstream 100 bases:
>100_bases CGCTTCGCGGGAAGGGGGGCGACGCCAGCGCGGCGGGGCGACCCTTGCGCGGCGTCTGCGCCACTGGAACGCGCCCGGTT TCTGGCGCTTCGGCGATTCC
Downstream 100 bases:
>100_bases ACGGCGCGGCGCGGCCCCCGGTGGTGCTCGACGTGGACGGCTCCGTGGGCGTGCTGCCCGGGGAGGTCCGCCTGCCGCTG GCGCGGGCGTGGCAGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSWRNRLEPESLVAHAGAHPPEGFAWLQGLPVPVFSAPFDLLTTADDEFKARLRGWPLFERWSRWLRVRTAFAGTTVTEY APLPRGAVPEAVATALRTGPGRDFALVIAKDLPQDSPLLAPEDNAYAQALAEACVRQGFVLVEGQALAYVPIDFGNLDEY LARLSSSRRSNLRRKLRSRSQLRTERVPTGDAYADDARVDACYALYEAVHAQSEVHFDRLTRDFFAAVLRDGGSGGIVFE YRHGGTGALLGWNLCYEHAGRLVDKYIGLSYPAAREVNLYFVSWMVNLEYAVERGLTHYIAGWTDPEVKRSLGASFTWTR HAVYVRNPLLRALARRFSGHFESDRRWKDSVEDAA
Sequences:
>Translated_355_residues MSWRNRLEPESLVAHAGAHPPEGFAWLQGLPVPVFSAPFDLLTTADDEFKARLRGWPLFERWSRWLRVRTAFAGTTVTEY APLPRGAVPEAVATALRTGPGRDFALVIAKDLPQDSPLLAPEDNAYAQALAEACVRQGFVLVEGQALAYVPIDFGNLDEY LARLSSSRRSNLRRKLRSRSQLRTERVPTGDAYADDARVDACYALYEAVHAQSEVHFDRLTRDFFAAVLRDGGSGGIVFE YRHGGTGALLGWNLCYEHAGRLVDKYIGLSYPAAREVNLYFVSWMVNLEYAVERGLTHYIAGWTDPEVKRSLGASFTWTR HAVYVRNPLLRALARRFSGHFESDRRWKDSVEDAA >Mature_354_residues SWRNRLEPESLVAHAGAHPPEGFAWLQGLPVPVFSAPFDLLTTADDEFKARLRGWPLFERWSRWLRVRTAFAGTTVTEYA PLPRGAVPEAVATALRTGPGRDFALVIAKDLPQDSPLLAPEDNAYAQALAEACVRQGFVLVEGQALAYVPIDFGNLDEYL ARLSSSRRSNLRRKLRSRSQLRTERVPTGDAYADDARVDACYALYEAVHAQSEVHFDRLTRDFFAAVLRDGGSGGIVFEY RHGGTGALLGWNLCYEHAGRLVDKYIGLSYPAAREVNLYFVSWMVNLEYAVERGLTHYIAGWTDPEVKRSLGASFTWTRH AVYVRNPLLRALARRFSGHFESDRRWKDSVEDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39864; Mature: 39733
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRNRLEPESLVAHAGAHPPEGFAWLQGLPVPVFSAPFDLLTTADDEFKARLRGWPLFE CCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHCCCHHHHHCCCHHHHHHHCCCCHHH RWSRWLRVRTAFAGTTVTEYAPLPRGAVPEAVATALRTGPGRDFALVIAKDLPQDSPLLA HHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC PEDNAYAQALAEACVRQGFVLVEGQALAYVPIDFGNLDEYLARLSSSRRSNLRRKLRSRS CCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLRTERVPTGDAYADDARVDACYALYEAVHAQSEVHFDRLTRDFFAAVLRDGGSGGIVFE HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE YRHGGTGALLGWNLCYEHAGRLVDKYIGLSYPAAREVNLYFVSWMVNLEYAVERGLTHYI EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCHHHH AGWTDPEVKRSLGASFTWTRHAVYVRNPLLRALARRFSGHFESDRRWKDSVEDAA CCCCCHHHHHHCCCCCEEHHCCHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCC >Mature Secondary Structure SWRNRLEPESLVAHAGAHPPEGFAWLQGLPVPVFSAPFDLLTTADDEFKARLRGWPLFE CCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCHHCCCHHHHHCCCHHHHHHHCCCCHHH RWSRWLRVRTAFAGTTVTEYAPLPRGAVPEAVATALRTGPGRDFALVIAKDLPQDSPLLA HHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC PEDNAYAQALAEACVRQGFVLVEGQALAYVPIDFGNLDEYLARLSSSRRSNLRRKLRSRS CCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLRTERVPTGDAYADDARVDACYALYEAVHAQSEVHFDRLTRDFFAAVLRDGGSGGIVFE HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE YRHGGTGALLGWNLCYEHAGRLVDKYIGLSYPAAREVNLYFVSWMVNLEYAVERGLTHYI EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCHHHH AGWTDPEVKRSLGASFTWTRHAVYVRNPLLRALARRFSGHFESDRRWKDSVEDAA CCCCCHHHHHHCCCCCEEHHCCHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA