Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612967
Identifier: 120612967
GI number: 120612967
Start: 4808653
End: 4809561
Strand: Reverse
Name: 120612967
Synonym: Aave_4331
Alternate gene names: NA
Gene position: 4809561-4808653 (Counterclockwise)
Preceding gene: 120612968
Following gene: 120612957
Centisome position: 89.85
GC content: 71.73
Gene sequence:
>909_bases ATGAACGGCGCGGCGCGGCCCCCGGTGGTGCTCGACGTGGACGGCTCCGTGGGCGTGCTGCCCGGGGAGGTCCGCCTGCC GCTGGCGCGGGCGTGGCAGGAGCGTATCCGCTTCGGCTGCGGCATGGGCACGATGCGCGCGTTCCGGCAGGCGCTGGAGC AGGCCATGCCGCCGGTGGCGGCGCACGGCACGGTGTTCATGGGCAGCGGGGATTTCCACCACCTGAGCTGGCCGCTCATC GAGCGCTGCATCGCCGCCCACGGGTTCTCCGCGGCGCAGCCGCTGCGGGTCGTCGTGCTGGACAACCATCCGGACAACAT GCGCTTTCCCTTCGGGGTGCATTGCGGCTCGTGGGTGCGGCGCGTGGCGCTGCTGCCGCAGGTGTCGCATGTGCACGTGG TGGGCATCACCTCGGGCGATATCGGCACGGGCCATGCCTGGGAGAACTACCTCGCGCCGCTGCGCGCGGGCCGGCTCACC TACTGGAGCAGCGGCGTGGACACGCGCTGGGCGCGCTGGCTGGGCATCGCGGACCGGTTCCGCGCATTCCCCGACGCCGA CGCCCTGATCGGCGAGCTGGTGCGCATGTTCGAACGGCAGCGGGCGCCCACCTATTTCAGCGTGGACAAGGACGTGCTTT CCCCCCGCGTGGTGCGCACGAACTGGGACCAGGGCACGCTGGAGACGCGCCATGCCGCGGCGGTCATCGCCGGCCTGCGC GACTGCGTCGTGGGCAGCGACGTGACGGGCGACGTTTCCACCCACCGCTATGCCACGGCCTGGAAGCGGTGGCTGAGCGC GGGCGACGGGCAGCAGACCGGAACGCAGCATGCCGACCTGCCGGCCTGGCAGTCCGCGCAGGCCGCGTTCAACATGTGGC TGCTCGATATGCTGGAAACGGACGGCTGA
Upstream 100 bases:
>100_bases CCGTCTATGTGCGCAACCCGTTGCTGCGCGCGCTGGCCCGTCGTTTCTCGGGCCATTTCGAGAGCGACCGGCGCTGGAAG GACAGCGTGGAGGACGCGGC
Downstream 100 bases:
>100_bases CGGCGTGTCGATCCGGCGGGCCGGCTCATCCGCCGGTCCGCACGGCCTGCTGCAGCAGCGCGCAGATCCGGTCGAAGCCG GCGTCGTCCAGCCAGGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MNGAARPPVVLDVDGSVGVLPGEVRLPLARAWQERIRFGCGMGTMRAFRQALEQAMPPVAAHGTVFMGSGDFHHLSWPLI ERCIAAHGFSAAQPLRVVVLDNHPDNMRFPFGVHCGSWVRRVALLPQVSHVHVVGITSGDIGTGHAWENYLAPLRAGRLT YWSSGVDTRWARWLGIADRFRAFPDADALIGELVRMFERQRAPTYFSVDKDVLSPRVVRTNWDQGTLETRHAAAVIAGLR DCVVGSDVTGDVSTHRYATAWKRWLSAGDGQQTGTQHADLPAWQSAQAAFNMWLLDMLETDG
Sequences:
>Translated_302_residues MNGAARPPVVLDVDGSVGVLPGEVRLPLARAWQERIRFGCGMGTMRAFRQALEQAMPPVAAHGTVFMGSGDFHHLSWPLI ERCIAAHGFSAAQPLRVVVLDNHPDNMRFPFGVHCGSWVRRVALLPQVSHVHVVGITSGDIGTGHAWENYLAPLRAGRLT YWSSGVDTRWARWLGIADRFRAFPDADALIGELVRMFERQRAPTYFSVDKDVLSPRVVRTNWDQGTLETRHAAAVIAGLR DCVVGSDVTGDVSTHRYATAWKRWLSAGDGQQTGTQHADLPAWQSAQAAFNMWLLDMLETDG >Mature_302_residues MNGAARPPVVLDVDGSVGVLPGEVRLPLARAWQERIRFGCGMGTMRAFRQALEQAMPPVAAHGTVFMGSGDFHHLSWPLI ERCIAAHGFSAAQPLRVVVLDNHPDNMRFPFGVHCGSWVRRVALLPQVSHVHVVGITSGDIGTGHAWENYLAPLRAGRLT YWSSGVDTRWARWLGIADRFRAFPDADALIGELVRMFERQRAPTYFSVDKDVLSPRVVRTNWDQGTLETRHAAAVIAGLR DCVVGSDVTGDVSTHRYATAWKRWLSAGDGQQTGTQHADLPAWQSAQAAFNMWLLDMLETDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33299; Mature: 33299
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAARPPVVLDVDGSVGVLPGEVRLPLARAWQERIRFGCGMGTMRAFRQALEQAMPPVA CCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC AHGTVFMGSGDFHHLSWPLIERCIAAHGFSAAQPLRVVVLDNHPDNMRFPFGVHCGSWVR CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH RVALLPQVSHVHVVGITSGDIGTGHAWENYLAPLRAGRLTYWSSGVDTRWARWLGIADRF HHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH RAFPDADALIGELVRMFERQRAPTYFSVDKDVLSPRVVRTNWDQGTLETRHAAAVIAGLR HCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH DCVVGSDVTGDVSTHRYATAWKRWLSAGDGQQTGTQHADLPAWQSAQAAFNMWLLDMLET HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DG CC >Mature Secondary Structure MNGAARPPVVLDVDGSVGVLPGEVRLPLARAWQERIRFGCGMGTMRAFRQALEQAMPPVA CCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC AHGTVFMGSGDFHHLSWPLIERCIAAHGFSAAQPLRVVVLDNHPDNMRFPFGVHCGSWVR CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH RVALLPQVSHVHVVGITSGDIGTGHAWENYLAPLRAGRLTYWSSGVDTRWARWLGIADRF HHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH RAFPDADALIGELVRMFERQRAPTYFSVDKDVLSPRVVRTNWDQGTLETRHAAAVIAGLR HCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHCCEEEEECCCCCCCHHHHHHHHHHHHH DCVVGSDVTGDVSTHRYATAWKRWLSAGDGQQTGTQHADLPAWQSAQAAFNMWLLDMLET HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA