Click here to switch to the map view.

The map label for this gene is 120612937

Identifier: 120612937

GI number: 120612937

Start: 4776481

End: 4778214

Strand: Direct

Name: 120612937

Synonym: Aave_4301

Alternate gene names: NA

Gene position: 4776481-4778214 (Clockwise)

Preceding gene: 120612936

Following gene: 120612951

Centisome position: 89.23

GC content: 72.84

Gene sequence:

>1734_bases
ATGATCCGCCTTTCTGAAATCAAGCTGCCGCTGGCCGCCCTGCCGGCCGACGGCACACAGCACCCCGGGCCCGCGCTGCG
CGCCGCCGCAGCGCGCATCCTGGACCTCCCGCCCGGCGACATCGCCCGCCTGAACGTCTTCAAGCGCAGCTTCGACGCGC
GCAAGCCCGAGCTGCTGGCCGTGTACATCGTGGACGTCGCCCTGGCCGACCCGGACCAGGCCGCCACGCTGCTGGCGCGC
CATGCGGGCCGCCCGCACATCCAGCCGACGCCCGACATGGCCTGGAAGCCCGTGGGCCATGCCCCGGCCGGCGGCCTGCG
CGAGCGCCCGGTGGTGGTGGGCTTCGGCCCCTGCGGGATCTTCGCCGCGCTGGTGCTGGCGCAGATGGGGCTGCGCCCCA
TCGTGCTGGAACGGGGCCGGGCCGTGCGCGAGCGCACCCAGGACACCTGGGGCCTGTGGCGCCGCCGCGAACTGCAGCCC
GAATCCAACGTGCAGTTCGGCGAGGGCGGCGCGGGCACGTTCAGCGACGGCAAGCTCTACAGCCAGATCAAGGACCCGCG
CCACCTCGGCCGCAAGGTGATGGAGGAATTCGTGCAGGCGGGCGCGCCGCCCGAGATCCTGTATGCCGCGCACCCGCACA
TCGGCACCTTCAAGCTGGTGAAGGTGGTCGAGACGCTGCGCGAGCAGATCATCGCGATGGGCGGCGAGGTGCGCTTCCAG
CAGCGGGTGACCGACATCGCGGTGGACGCCGACGCTGCCGGCCGCCGGCACCTGCGCGGCCTGCGCGTGCTGGACCAGGC
CACCGGCCAGACCCACGAACTGGAGGCGTCGCACGTCGTCATGGCGCTGGGCCACAGCTCGCGCGACACCTTCGCGATGC
TGTACGGCCGCGGCGTGCACATGGAGGCCAAGCCGTTCTCGGTGGGCTTGCGCATCGAGCATCCGCAGGGGCTCATCGAC
CGCGCCCGCTGGGGCCGCCACGCCGGCCACCCGCTGCTGGGCGCGGCCGACTACAAGCTCGTGCACCATGCCGGCAACGG
CCGCGCGGTGTACAGCTTCTGCATGTGCCCCGGCGGCACGGTGGTGGCCGCCACCAGCGAGCCCGGCCGCGTGGTGACCA
ACGGCATGAGCCAGTATTCGCGCAACGAGCGCAATGCCAACGCCGGCATGGTGGTGGGCATCGACCCGGCCGACTACCCC
ACGGACCCGGCCGCCTTCGAGGCGGCGCTGGGCGCCACCCATGGCGTCGAGGCCCTGCCCGCGGGCCAGGCCCATCCGCT
CGCGGGCATCGTGCTGCAGCGGCAGCTGGAATCCGGCGCCTTCGCCCTGGGCGGCGGCAACTACAACGCGCCCGGCCAGC
TGGTGGGGGATTTCATCGCGGGCCGCGTCTCGCGCGAGTTGGGCGATGTGGAACCCTCGTACCGGCCGGGCGTCACCCTG
GCCGACCTGCACGCGGCCCTGCCGGACTATGCGATCGCCGCGCTGCGCGAGGCGCTGCCGGCCTTCGGCCGCAAGATCCA
GGGCTTCGACCGCCACGACGCCGTGCTGACGGGCGTGGAAACGCGCACCTCGTCGCCGCTCAAGATCGGCCGGGGCGAGG
ACTTCCAGAGCCTGAATACCGCCGGCCTCTACCCCGCGGGCGAAGGCGCGAGCTACGCGGGCGGCATCCTGTCGGCGGGC
GTGGACGGGATCAAGGTGGGTGAAGCGGTGGCGAAACGCATGCTTGCCCCCTGA

Upstream 100 bases:

>100_bases
CTCGGCGGGCTGGGCGGGCAGATGAGCGCGTTTGCGCGCGCAGGCGTATGATTTCTGGCCTTTTTCCTGCACCGCCCGAT
GACCACGGGCCGCACTCGCC

Downstream 100 bases:

>100_bases
GTCGCCAGCGGATCAGCGGATCAGCGCATAGCCCAGTAGCCGGGCCGCATGTGCCAGCCGCCCGGGCCGGGCTCCCAGCG
GTGGGGCACCCAGACCCAGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MIRLSEIKLPLAALPADGTQHPGPALRAAAARILDLPPGDIARLNVFKRSFDARKPELLAVYIVDVALADPDQAATLLAR
HAGRPHIQPTPDMAWKPVGHAPAGGLRERPVVVGFGPCGIFAALVLAQMGLRPIVLERGRAVRERTQDTWGLWRRRELQP
ESNVQFGEGGAGTFSDGKLYSQIKDPRHLGRKVMEEFVQAGAPPEILYAAHPHIGTFKLVKVVETLREQIIAMGGEVRFQ
QRVTDIAVDADAAGRRHLRGLRVLDQATGQTHELEASHVVMALGHSSRDTFAMLYGRGVHMEAKPFSVGLRIEHPQGLID
RARWGRHAGHPLLGAADYKLVHHAGNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGMVVGIDPADYP
TDPAAFEAALGATHGVEALPAGQAHPLAGIVLQRQLESGAFALGGGNYNAPGQLVGDFIAGRVSRELGDVEPSYRPGVTL
ADLHAALPDYAIAALREALPAFGRKIQGFDRHDAVLTGVETRTSSPLKIGRGEDFQSLNTAGLYPAGEGASYAGGILSAG
VDGIKVGEAVAKRMLAP

Sequences:

>Translated_577_residues
MIRLSEIKLPLAALPADGTQHPGPALRAAAARILDLPPGDIARLNVFKRSFDARKPELLAVYIVDVALADPDQAATLLAR
HAGRPHIQPTPDMAWKPVGHAPAGGLRERPVVVGFGPCGIFAALVLAQMGLRPIVLERGRAVRERTQDTWGLWRRRELQP
ESNVQFGEGGAGTFSDGKLYSQIKDPRHLGRKVMEEFVQAGAPPEILYAAHPHIGTFKLVKVVETLREQIIAMGGEVRFQ
QRVTDIAVDADAAGRRHLRGLRVLDQATGQTHELEASHVVMALGHSSRDTFAMLYGRGVHMEAKPFSVGLRIEHPQGLID
RARWGRHAGHPLLGAADYKLVHHAGNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGMVVGIDPADYP
TDPAAFEAALGATHGVEALPAGQAHPLAGIVLQRQLESGAFALGGGNYNAPGQLVGDFIAGRVSRELGDVEPSYRPGVTL
ADLHAALPDYAIAALREALPAFGRKIQGFDRHDAVLTGVETRTSSPLKIGRGEDFQSLNTAGLYPAGEGASYAGGILSAG
VDGIKVGEAVAKRMLAP
>Mature_577_residues
MIRLSEIKLPLAALPADGTQHPGPALRAAAARILDLPPGDIARLNVFKRSFDARKPELLAVYIVDVALADPDQAATLLAR
HAGRPHIQPTPDMAWKPVGHAPAGGLRERPVVVGFGPCGIFAALVLAQMGLRPIVLERGRAVRERTQDTWGLWRRRELQP
ESNVQFGEGGAGTFSDGKLYSQIKDPRHLGRKVMEEFVQAGAPPEILYAAHPHIGTFKLVKVVETLREQIIAMGGEVRFQ
QRVTDIAVDADAAGRRHLRGLRVLDQATGQTHELEASHVVMALGHSSRDTFAMLYGRGVHMEAKPFSVGLRIEHPQGLID
RARWGRHAGHPLLGAADYKLVHHAGNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRNERNANAGMVVGIDPADYP
TDPAAFEAALGATHGVEALPAGQAHPLAGIVLQRQLESGAFALGGGNYNAPGQLVGDFIAGRVSRELGDVEPSYRPGVTL
ADLHAALPDYAIAALREALPAFGRKIQGFDRHDAVLTGVETRTSSPLKIGRGEDFQSLNTAGLYPAGEGASYAGGILSAG
VDGIKVGEAVAKRMLAP

Specific function: Unknown

COG id: COG2509

COG function: function code R; Uncharacterized FAD-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 61440; Mature: 61440

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLSEIKLPLAALPADGTQHPGPALRAAAARILDLPPGDIARLNVFKRSFDARKPELLA
CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEE
VYIVDVALADPDQAATLLARHAGRPHIQPTPDMAWKPVGHAPAGGLRERPVVVGFGPCGI
EEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
FAALVLAQMGLRPIVLERGRAVRERTQDTWGLWRRRELQPESNVQFGEGGAGTFSDGKLY
HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
SQIKDPRHLGRKVMEEFVQAGAPPEILYAAHPHIGTFKLVKVVETLREQIIAMGGEVRFQ
HHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH
QRVTDIAVDADAAGRRHLRGLRVLDQATGQTHELEASHVVMALGHSSRDTFAMLYGRGVH
HHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEEECCCCC
MEAKPFSVGLRIEHPQGLIDRARWGRHAGHPLLGAADYKLVHHAGNGRAVYSFCMCPGGT
EECCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCE
VVAATSEPGRVVTNGMSQYSRNERNANAGMVVGIDPADYPTDPAAFEAALGATHGVEALP
EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC
AGQAHPLAGIVLQRQLESGAFALGGGNYNAPGQLVGDFIAGRVSRELGDVEPSYRPGVTL
CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
ADLHAALPDYAIAALREALPAFGRKIQGFDRHDAVLTGVETRTSSPLKIGRGEDFQSLNT
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCC
AGLYPAGEGASYAGGILSAGVDGIKVGEAVAKRMLAP
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRLSEIKLPLAALPADGTQHPGPALRAAAARILDLPPGDIARLNVFKRSFDARKPELLA
CCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEE
VYIVDVALADPDQAATLLARHAGRPHIQPTPDMAWKPVGHAPAGGLRERPVVVGFGPCGI
EEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
FAALVLAQMGLRPIVLERGRAVRERTQDTWGLWRRRELQPESNVQFGEGGAGTFSDGKLY
HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
SQIKDPRHLGRKVMEEFVQAGAPPEILYAAHPHIGTFKLVKVVETLREQIIAMGGEVRFQ
HHHCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEHH
QRVTDIAVDADAAGRRHLRGLRVLDQATGQTHELEASHVVMALGHSSRDTFAMLYGRGVH
HHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCEEEEECCCCC
MEAKPFSVGLRIEHPQGLIDRARWGRHAGHPLLGAADYKLVHHAGNGRAVYSFCMCPGGT
EECCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCE
VVAATSEPGRVVTNGMSQYSRNERNANAGMVVGIDPADYPTDPAAFEAALGATHGVEALP
EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC
AGQAHPLAGIVLQRQLESGAFALGGGNYNAPGQLVGDFIAGRVSRELGDVEPSYRPGVTL
CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
ADLHAALPDYAIAALREALPAFGRKIQGFDRHDAVLTGVETRTSSPLKIGRGEDFQSLNT
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCC
AGLYPAGEGASYAGGILSAGVDGIKVGEAVAKRMLAP
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396545 [H]