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The map label for this gene is 120612932

Identifier: 120612932

GI number: 120612932

Start: 4769307

End: 4771610

Strand: Reverse

Name: 120612932

Synonym: Aave_4296

Alternate gene names: NA

Gene position: 4771610-4769307 (Counterclockwise)

Preceding gene: 120612938

Following gene: 120612931

Centisome position: 89.14

GC content: 67.4

Gene sequence:

>2304_bases
ATGCGGAAAATCGTCTCCTCGCGCTCCCGCGCACGCCTGTCCTTCATGCTCGCCGCCGTGCTCACGGCCTGCGGCGGCAG
CGGCGGCGAATCCCCTGCCGCGCCCGCGGTTGCGGCCACCGTCAGGTCCGGGGCTGCCGGTCCGGCCACGCCGGGCGTCG
CGCTGCGGCGCCCCGTATCGCCGCAGCAACCGATGTTCCTGGTCCACGTGGACACCTGGAATTCGGCCGATCCCCAGAAG
ATCATCGACCTCATCCCGCAGGACGTCCGCCCCTACACGGTGCTGGTGCTCTCGCTGTCCATCCTCCACGACGACAAGAC
GTCCACGCCCGCCCAGTGCCGCTGGCGGCAGGTGGAGAACGGCATCGAGACGGCCCGCTCGTGGATCAAGGTGGCCGCCG
ACAACCGGATGTGGGCCATGGTCCAGCCGTCCAGCGGCGGGTTCACCCATTTCCCGGACTACGACGGAAACGCCGACCTG
GAAACGACCGTCTATGGCGAGTTCTTCCGGGACTATCCGAACTTCCTGGGCTTCAACTACGCCGAGCAGTTCTGGGGATT
CGACCAGACCTGCTCCCCGTCGGCGGACAAGCGCTGGGAGCACTGGGCCAACCTGCTGAAGCTCACGAACAAGTACGGCG
GCTATCTCGACGTCAGCTTCACCGGGGGGTTCTGGGGCGCGGCGCTCAATCCGCTGGCGATGGCCAAGCGCAGCCCGGTG
CTGGAGGGCGCGCTCAGGGCGTATGCGAAGAATTTCATCATCGAGGAGAAGTTCACCGCGAACTACGGCTTCCACGACAA
CGAAAGCGTGAGCCTGGGCATGTACCTGTCCGGCTATGCCGGCAACTACGGCATCCGCCCGGACCGTTCGGGCTGGTACA
ACGCCGATGGCTCCAGCACGTATCCGGTGCCCGCGGGCGCGCCCCACCTCATCGAGCACCTGGCGCTGACGGGGCAGACC
GTGTTCGACGGCCCCGAACTGATCATGCTCGACATGGTCAGGAACCAGCCCAACGGGCAGACTTCCGACGGCTACTCCAC
GCGGCGCTGGGATTTCCATCCCCAGTTCCGCAACATCCACCTCGACATCTACCGCAAGATCCTCGACGGCACGCTGCGCA
TCCCCAGCCGCAAGGAAGTCATCGACCGCACCCGGATCGCCATCGTCAACGACGTGACCTCGGGCAGCGACCGCGCCCTC
TATTCCACGCCGGAAACGCTTTACTCCGGGCTGTACGCGATGGACGGCGACGGCACCTACCTGAACCAGCACAGCTGGAC
CAAGAAGACCGGGCGGTATCCCGCCATTCCCACCGTCTGGCAACTGACGGACGACCTCGCGCAGTCGTTCCGGACCACGG
TGAAGAAGTCGGAGTACGCCAGCCGCTGGCCCGGCCCCGCGGCCAAGCAGGCCGAATTCGACGCGCTGTTCCCGCAGGAA
GCCACGGGCGACATCTATGCAGGCCGCCTGGAGAACACCTGGGTGACCTACAACCCCTACCGCACCAGCCAGGCGGCCAG
CGGCAGCATTCCCTTCAAGTACAACACCTGCGCCGGCCTGGACGTGACCTACCCGCCCTTCACGACCGGCGTGGTGAAGG
AGTACCCGGACAAGGTCTCCATCTACCTCACGAACTATGACCCGGAGAATGCCGCGCTCAAGAAGAGCCGGATCGTTTTC
CGGGGCGCCGCCTCGCAGCCGGCCTTCTCCTTCCAGGACCGCGGCGACCATGTTGCGAGCCAGGTGGCGGGCACCTGGGC
GGACGGCGTGCTCACGCTGGACGTGGCGCACAACGGGGCGCTGGACCTGACGGTGAACTGCTCGGGGCCTGCCGGCGGCC
GGCTCACGGGCTACACGGAGGCCGGCATCCAGGTGCCCGACGCCCCTCCCGTCTACGCCGGAGCGCACCAGTACGAGGCC
GAGCATTTCGATTTCCGCAACATCGCCCGCATGGTCGCCAACGGGGTGAACGAGGCGGTCCGCAACTACCAGGGGCTGGG
CTACGTGAACTTCGGCACCAGCAGCGCCGCGAGCGTGCGCGGCCGCGTCCAGGTGCCTGCCGCCGGCCGCTACCAGTTGC
TGACCCGCTATGCGGTGGCGGGCGCCGACGTGGGAACGATCGACATGTACGTGAACGGCGCGCGCGTCGCGTCGCCCGTT
TTCGCGCAGACCCCCTCGGTCAGCGACTGGGCGGTACAGGCGTTGCCGGTGGACCTGCAGGCGGGGGTGAACACGGTGGA
GTTCCGGGCGCGGGCCGCGGCGCCGGCTTCCGTGTATTTCGACAACGTCGTCCTGCGGCAGTGA

Upstream 100 bases:

>100_bases
GGTGACTGGATGGCCGGGCGCGCGGATATTCTCCGTCCACTCTGCAGGAACGCCTTCCTGCGGAGAACGCGGATCTCCGC
CATACAGAAATACACCAACC

Downstream 100 bases:

>100_bases
CGGCGGGAACGGGGCCCGGCCTCGTGGTTTCCCCTGAACCACCCGGGTCCGCGTTTCCACCATCCTCGGGCGCATGTCCG
AAGAACTCTCGCTCCACCAG

Product: carbohydrate-binding family 6 protein

Products: NA

Alternate protein names: Endo-Beta-Galactosidase; Fucolectin-Related Protein; Lipoprotein

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MRKIVSSRSRARLSFMLAAVLTACGGSGGESPAAPAVAATVRSGAAGPATPGVALRRPVSPQQPMFLVHVDTWNSADPQK
IIDLIPQDVRPYTVLVLSLSILHDDKTSTPAQCRWRQVENGIETARSWIKVAADNRMWAMVQPSSGGFTHFPDYDGNADL
ETTVYGEFFRDYPNFLGFNYAEQFWGFDQTCSPSADKRWEHWANLLKLTNKYGGYLDVSFTGGFWGAALNPLAMAKRSPV
LEGALRAYAKNFIIEEKFTANYGFHDNESVSLGMYLSGYAGNYGIRPDRSGWYNADGSSTYPVPAGAPHLIEHLALTGQT
VFDGPELIMLDMVRNQPNGQTSDGYSTRRWDFHPQFRNIHLDIYRKILDGTLRIPSRKEVIDRTRIAIVNDVTSGSDRAL
YSTPETLYSGLYAMDGDGTYLNQHSWTKKTGRYPAIPTVWQLTDDLAQSFRTTVKKSEYASRWPGPAAKQAEFDALFPQE
ATGDIYAGRLENTWVTYNPYRTSQAASGSIPFKYNTCAGLDVTYPPFTTGVVKEYPDKVSIYLTNYDPENAALKKSRIVF
RGAASQPAFSFQDRGDHVASQVAGTWADGVLTLDVAHNGALDLTVNCSGPAGGRLTGYTEAGIQVPDAPPVYAGAHQYEA
EHFDFRNIARMVANGVNEAVRNYQGLGYVNFGTSSAASVRGRVQVPAAGRYQLLTRYAVAGADVGTIDMYVNGARVASPV
FAQTPSVSDWAVQALPVDLQAGVNTVEFRARAAAPASVYFDNVVLRQ

Sequences:

>Translated_767_residues
MRKIVSSRSRARLSFMLAAVLTACGGSGGESPAAPAVAATVRSGAAGPATPGVALRRPVSPQQPMFLVHVDTWNSADPQK
IIDLIPQDVRPYTVLVLSLSILHDDKTSTPAQCRWRQVENGIETARSWIKVAADNRMWAMVQPSSGGFTHFPDYDGNADL
ETTVYGEFFRDYPNFLGFNYAEQFWGFDQTCSPSADKRWEHWANLLKLTNKYGGYLDVSFTGGFWGAALNPLAMAKRSPV
LEGALRAYAKNFIIEEKFTANYGFHDNESVSLGMYLSGYAGNYGIRPDRSGWYNADGSSTYPVPAGAPHLIEHLALTGQT
VFDGPELIMLDMVRNQPNGQTSDGYSTRRWDFHPQFRNIHLDIYRKILDGTLRIPSRKEVIDRTRIAIVNDVTSGSDRAL
YSTPETLYSGLYAMDGDGTYLNQHSWTKKTGRYPAIPTVWQLTDDLAQSFRTTVKKSEYASRWPGPAAKQAEFDALFPQE
ATGDIYAGRLENTWVTYNPYRTSQAASGSIPFKYNTCAGLDVTYPPFTTGVVKEYPDKVSIYLTNYDPENAALKKSRIVF
RGAASQPAFSFQDRGDHVASQVAGTWADGVLTLDVAHNGALDLTVNCSGPAGGRLTGYTEAGIQVPDAPPVYAGAHQYEA
EHFDFRNIARMVANGVNEAVRNYQGLGYVNFGTSSAASVRGRVQVPAAGRYQLLTRYAVAGADVGTIDMYVNGARVASPV
FAQTPSVSDWAVQALPVDLQAGVNTVEFRARAAAPASVYFDNVVLRQ
>Mature_767_residues
MRKIVSSRSRARLSFMLAAVLTACGGSGGESPAAPAVAATVRSGAAGPATPGVALRRPVSPQQPMFLVHVDTWNSADPQK
IIDLIPQDVRPYTVLVLSLSILHDDKTSTPAQCRWRQVENGIETARSWIKVAADNRMWAMVQPSSGGFTHFPDYDGNADL
ETTVYGEFFRDYPNFLGFNYAEQFWGFDQTCSPSADKRWEHWANLLKLTNKYGGYLDVSFTGGFWGAALNPLAMAKRSPV
LEGALRAYAKNFIIEEKFTANYGFHDNESVSLGMYLSGYAGNYGIRPDRSGWYNADGSSTYPVPAGAPHLIEHLALTGQT
VFDGPELIMLDMVRNQPNGQTSDGYSTRRWDFHPQFRNIHLDIYRKILDGTLRIPSRKEVIDRTRIAIVNDVTSGSDRAL
YSTPETLYSGLYAMDGDGTYLNQHSWTKKTGRYPAIPTVWQLTDDLAQSFRTTVKKSEYASRWPGPAAKQAEFDALFPQE
ATGDIYAGRLENTWVTYNPYRTSQAASGSIPFKYNTCAGLDVTYPPFTTGVVKEYPDKVSIYLTNYDPENAALKKSRIVF
RGAASQPAFSFQDRGDHVASQVAGTWADGVLTLDVAHNGALDLTVNCSGPAGGRLTGYTEAGIQVPDAPPVYAGAHQYEA
EHFDFRNIARMVANGVNEAVRNYQGLGYVNFGTSSAASVRGRVQVPAAGRYQLLTRYAVAGADVGTIDMYVNGARVASPV
FAQTPSVSDWAVQALPVDLQAGVNTVEFRARAAAPASVYFDNVVLRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84017; Mature: 84017

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVSSRSRARLSFMLAAVLTACGGSGGESPAAPAVAATVRSGAAGPATPGVALRRPVS
CCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCC
PQQPMFLVHVDTWNSADPQKIIDLIPQDVRPYTVLVLSLSILHDDKTSTPAQCRWRQVEN
CCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHH
GIETARSWIKVAADNRMWAMVQPSSGGFTHFPDYDGNADLETTVYGEFFRDYPNFLGFNY
HHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCH
AEQFWGFDQTCSPSADKRWEHWANLLKLTNKYGGYLDVSFTGGFWGAALNPLAMAKRSPV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHCCHH
LEGALRAYAKNFIIEEKFTANYGFHDNESVSLGMYLSGYAGNYGIRPDRSGWYNADGSST
HHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YPVPAGAPHLIEHLALTGQTVFDGPELIMLDMVRNQPNGQTSDGYSTRRWDFHPQFRNIH
CCCCCCCHHHHHHHHHCCCEEECCCCEEEEEEHHCCCCCCCCCCCCCCEECCCCCHHCCH
LDIYRKILDGTLRIPSRKEVIDRTRIAIVNDVTSGSDRALYSTPETLYSGLYAMDGDGTY
HHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCCCCEEECCHHHHHCCCEEECCCCCE
LNQHSWTKKTGRYPAIPTVWQLTDDLAQSFRTTVKKSEYASRWPGPAAKQAEFDALFPQE
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATGDIYAGRLENTWVTYNPYRTSQAASGSIPFKYNTCAGLDVTYPPFTTGVVKEYPDKVS
CCCCEEECEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEECCCCCCCHHHHHCCCEEE
IYLTNYDPENAALKKSRIVFRGAASQPAFSFQDRGDHVASQVAGTWADGVLTLDVAHNGA
EEEECCCCCCHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCE
LDLTVNCSGPAGGRLTGYTEAGIQVPDAPPVYAGAHQYEAEHFDFRNIARMVANGVNEAV
EEEEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH
RNYQGLGYVNFGTSSAASVRGRVQVPAAGRYQLLTRYAVAGADVGTIDMYVNGARVASPV
HHCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHCCCH
FAQTPSVSDWAVQALPVDLQAGVNTVEFRARAAAPASVYFDNVVLRQ
HHCCCCCCCCEEEEECCHHHCCCCEEEEHHHHCCCHHEEECCEEECC
>Mature Secondary Structure
MRKIVSSRSRARLSFMLAAVLTACGGSGGESPAAPAVAATVRSGAAGPATPGVALRRPVS
CCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCC
PQQPMFLVHVDTWNSADPQKIIDLIPQDVRPYTVLVLSLSILHDDKTSTPAQCRWRQVEN
CCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHH
GIETARSWIKVAADNRMWAMVQPSSGGFTHFPDYDGNADLETTVYGEFFRDYPNFLGFNY
HHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCH
AEQFWGFDQTCSPSADKRWEHWANLLKLTNKYGGYLDVSFTGGFWGAALNPLAMAKRSPV
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHCCHH
LEGALRAYAKNFIIEEKFTANYGFHDNESVSLGMYLSGYAGNYGIRPDRSGWYNADGSST
HHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
YPVPAGAPHLIEHLALTGQTVFDGPELIMLDMVRNQPNGQTSDGYSTRRWDFHPQFRNIH
CCCCCCCHHHHHHHHHCCCEEECCCCEEEEEEHHCCCCCCCCCCCCCCEECCCCCHHCCH
LDIYRKILDGTLRIPSRKEVIDRTRIAIVNDVTSGSDRALYSTPETLYSGLYAMDGDGTY
HHHHHHHHCCCCCCCCHHHHHHHHEEEEEECCCCCCCCEEECCHHHHHCCCEEECCCCCE
LNQHSWTKKTGRYPAIPTVWQLTDDLAQSFRTTVKKSEYASRWPGPAAKQAEFDALFPQE
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ATGDIYAGRLENTWVTYNPYRTSQAASGSIPFKYNTCAGLDVTYPPFTTGVVKEYPDKVS
CCCCEEECEECCCEEEECCCCCCCCCCCCCCEEECCCCCCEECCCCCCCHHHHHCCCEEE
IYLTNYDPENAALKKSRIVFRGAASQPAFSFQDRGDHVASQVAGTWADGVLTLDVAHNGA
EEEECCCCCCHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCE
LDLTVNCSGPAGGRLTGYTEAGIQVPDAPPVYAGAHQYEAEHFDFRNIARMVANGVNEAV
EEEEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH
RNYQGLGYVNFGTSSAASVRGRVQVPAAGRYQLLTRYAVAGADVGTIDMYVNGARVASPV
HHCCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHCCCH
FAQTPSVSDWAVQALPVDLQAGVNTVEFRARAAAPASVYFDNVVLRQ
HHCCCCCCCCEEEEECCHHHCCCCEEEEHHHHCCCHHEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA