Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612931
Identifier: 120612931
GI number: 120612931
Start: 4768436
End: 4769233
Strand: Reverse
Name: 120612931
Synonym: Aave_4295
Alternate gene names: NA
Gene position: 4769233-4768436 (Counterclockwise)
Preceding gene: 120612932
Following gene: 120612929
Centisome position: 89.1
GC content: 73.18
Gene sequence:
>798_bases ATGTCCGAAGAACTCTCGCTCCACCAGCGCCGCCGGCGTCCCACGCCGGCCGAGCTGCAGGGGATTCCCTGGCTGGCCGC CCTCGCACCCGCCGAACGCGACCGGGCGATGGATGCGCTGGTGGTGGGCGATGCCCAGGTCGGCGACTTCGTGTGCCGGC GCGGCCGGCCCGTCACCTACTGGTTCGGCGTGGTGGAGGGCCTGCTCAAGATGAGCACCGACAACGCCCAGGGGCAGACC ATGACGTTCGCGGGCGTGCCGCCCGGCGGCTGGTTCGGCGAAGGCACGGCCGTGAAGCGCGAACCCTACCGCTACGACAT CCAGGCGCTGCGCCGCAGCGTGGTGGCCGGGCTGCCGATCGACACCTTCCACTGGCTGCTGGACCACTCCCTGGGCTTCA ACCGCTTCGTGATGCAGCAGCTCAACGAACGGCTGGGCCAGTTCATCGCCGCGCGGGAGATCGAGCGCCTGGGCAGCCCG GACGCGCGCGTGGCGCGGGGGCTGGCGGCGCTCTTCAACCCGCTGCTCTATCCCGGCGTGGGCCACGTGCTGCGCATCAC GCAGCAGGAACTGGGCTACCTGGTGGGCCTGTCGCGCCAGCGCGTGAACGAGGCGCTGGCCGCATTGCAGGCGCAGGGCG CCATCCGCGTGGAATATGGCGGCCTGCGGGTGCTGGACCTTCCCGCGCTGCGCGACAGCGTTTTCGGTGCCGGCGAGCCG CTGGCCTCGCACCCGCGGACCAGGGGGCGGCGGGGCGGGGCGGCCCGCCGGGCGGTCAGCCCGGCAGCGCGGGCGTGA
Upstream 100 bases:
>100_bases TTCGACAACGTCGTCCTGCGGCAGTGACGGCGGGAACGGGGCCCGGCCTCGTGGTTTCCCCTGAACCACCCGGGTCCGCG TTTCCACCATCCTCGGGCGC
Downstream 100 bases:
>100_bases GTGGAGCGGCGCCCGAGGCGTCGCGCTGCAGGCGGAAGGCTCCCACCATCTCGGTCAGGCGGCCGGCCTGCTCGCGCAGG CTGCCCGCCGCCGCGCTGCT
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; Cyclic-Nucleotide-Gated Cation Channel; CNMP Regulatory Protein; HTH Crp Family Transcriptional Regulator; Transcriptional Regulator Crp Family
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSEELSLHQRRRRPTPAELQGIPWLAALAPAERDRAMDALVVGDAQVGDFVCRRGRPVTYWFGVVEGLLKMSTDNAQGQT MTFAGVPPGGWFGEGTAVKREPYRYDIQALRRSVVAGLPIDTFHWLLDHSLGFNRFVMQQLNERLGQFIAAREIERLGSP DARVARGLAALFNPLLYPGVGHVLRITQQELGYLVGLSRQRVNEALAALQAQGAIRVEYGGLRVLDLPALRDSVFGAGEP LASHPRTRGRRGGAARRAVSPAARA
Sequences:
>Translated_265_residues MSEELSLHQRRRRPTPAELQGIPWLAALAPAERDRAMDALVVGDAQVGDFVCRRGRPVTYWFGVVEGLLKMSTDNAQGQT MTFAGVPPGGWFGEGTAVKREPYRYDIQALRRSVVAGLPIDTFHWLLDHSLGFNRFVMQQLNERLGQFIAAREIERLGSP DARVARGLAALFNPLLYPGVGHVLRITQQELGYLVGLSRQRVNEALAALQAQGAIRVEYGGLRVLDLPALRDSVFGAGEP LASHPRTRGRRGGAARRAVSPAARA >Mature_264_residues SEELSLHQRRRRPTPAELQGIPWLAALAPAERDRAMDALVVGDAQVGDFVCRRGRPVTYWFGVVEGLLKMSTDNAQGQTM TFAGVPPGGWFGEGTAVKREPYRYDIQALRRSVVAGLPIDTFHWLLDHSLGFNRFVMQQLNERLGQFIAAREIERLGSPD ARVARGLAALFNPLLYPGVGHVLRITQQELGYLVGLSRQRVNEALAALQAQGAIRVEYGGLRVLDLPALRDSVFGAGEPL ASHPRTRGRRGGAARRAVSPAARA
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29068; Mature: 28937
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEELSLHQRRRRPTPAELQGIPWLAALAPAERDRAMDALVVGDAQVGDFVCRRGRPVTY CCCCHHHHHHHCCCCCCHHCCCCHHHHHCCCHHHHHHHEEEECCCHHHHHHHHCCCCEEH WFGVVEGLLKMSTDNAQGQTMTFAGVPPGGWFGEGTAVKREPYRYDIQALRRSVVAGLPI HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH DTFHWLLDHSLGFNRFVMQQLNERLGQFIAAREIERLGSPDARVARGLAALFNPLLYPGV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC GHVLRITQQELGYLVGLSRQRVNEALAALQAQGAIRVEYGGLRVLDLPALRDSVFGAGEP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHCCCCCC LASHPRTRGRRGGAARRAVSPAARA HHCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure SEELSLHQRRRRPTPAELQGIPWLAALAPAERDRAMDALVVGDAQVGDFVCRRGRPVTY CCCHHHHHHHCCCCCCHHCCCCHHHHHCCCHHHHHHHEEEECCCHHHHHHHHCCCCEEH WFGVVEGLLKMSTDNAQGQTMTFAGVPPGGWFGEGTAVKREPYRYDIQALRRSVVAGLPI HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH DTFHWLLDHSLGFNRFVMQQLNERLGQFIAAREIERLGSPDARVARGLAALFNPLLYPGV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC GHVLRITQQELGYLVGLSRQRVNEALAALQAQGAIRVEYGGLRVLDLPALRDSVFGAGEP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEEEECHHHHHHHCCCCCC LASHPRTRGRRGGAARRAVSPAARA HHCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA