| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is rhsD [H]
Identifier: 120612919
GI number: 120612919
Start: 4750529
End: 4755568
Strand: Direct
Name: rhsD [H]
Synonym: Aave_4283
Alternate gene names: 120612919
Gene position: 4750529-4755568 (Clockwise)
Preceding gene: 120612915
Following gene: 120612920
Centisome position: 88.75
GC content: 65.83
Gene sequence:
>5040_bases ATGAGCGGCAAACCCGCCGCCCGCCAGGGCGACTTGACGAAAAAAGGCGGCCCGATCGTCCAGGGCTCGGCGACGGTGCT GATCGGCTCGGCGGGAGGCGTGGCGTGCTCGGTGTGCCCCGGGGGCATGGCGGTGGGCAACCCGGTGAACCCGGCGCTGG GCGCGAAGGTGCTCACGGGGGGCGATGAACTGGACTTCGCGCTGCCCGGGCCATTGCCGCTGGCGTGGCAGCGGGTGTAC AGCAGCTATGTGAACGCGGAGCATGGCGCGGCGTGCGGGCTGCTGGGGTATGGGTGGAAGCTGCCGCTGGAACTGCGGTT GGTACTGCAGGATGAGCGCGCGGTGCTCTTCGATGCATCCGGGCGGGCGATCACGTTCGAGGAGCCCTTGCAGCCGGGGC AGGCGCTGCACAGCAGCAGCGAGGACCTGTGGCTGTTGCGGGGTGGGGGCATGGCTGGCTCCACGGCCCCATCCTCCACG CCTGCCGAACTGCTGCCCTGGGCGCAGCAACCGCGCTGGTCGCACGTGCCGGCGGTGCTGCGTGCGGACCCGGGCTGCGT GATCGCCGTGCCGGGCGCGGGCGGTGCTGGTGCGCCGGTCTGGGTGTTCCTGACGGCGGGCGTATCGGGCGACGGAACAG CTTCGGGCCATGTCCTGCATGCCGTGATCGACCGCTTCGGCCGCAGCCAGCGCTACCAGTGGGGCACGGAAGGCGAACAG CAGGGCCGCGTCGCAGGCATCACCGATGGCAGCGGGCGACGCTATGCGCTGCGCTACGAGCGCATTGCCCCGGATGCCAC TGCGGCCCGCAAGCCCGGCAAGCCGGATGAGGGCGGACGTGCACGCCATCCGCTGCTCGGCCCCGATGACGGCGTACGGC TGGTCGGCGTGGACTGCACCTTCAACCCGCTCGACCCTGCAGTGATACCCGGCGCGGCCCCGCGCCCGCAACCCCTGGTG GGCTACCGCTACGACAGCGCAGGCAACCTGGCCGAGGTACTGGGCGCGGACGGCACCGTGCTGCGCCGCTTCGGCTACGA CGCATTGCACCGCATGACCGAGCACCAGGTGCGCCAGGGCCCCAGGCACCGCTACGTCTATGAAGACCAGACCGCGCAGG GCCGCCGCCAGGGATGGGCTGCCCGCCCGGGCGCCCGCGTGGCCGAGCAGCACAACGAGGAAGGGCTGTCGTACTTCTTC GACTACGGCGGCGCTCCGGTAGCGGCCGGTGACGGACCTGCCGCCTCGGTGCGCAGCAGCACGGTCGTGCGCGACAGCCT GGGCCGCACCACGACCTACCACTTCGAGGGCGAAGGGGGGCTCAAGCGCCTCGTGCGGCTGACAGGCCCGGACGGTGCCG AGCAGAGCTACCGCCATGACAGCGCCGGCCGCAGGTTGTCGGCCACCGATGCGCTGGGCCGCACCACGTGGTGGCGCTAT GACGGCGCAGGCCGGCTGCTGGGCGTGCAGGGCCCGGATGGCCGCAGCACCCAGCAGCGCTGGGGCGCAGCAGGCAGCGC GCAGGACGGCCTGCTGCTGGCGAGCCAGGACGCGGCGGGCCTGCGCACGCACTACCGCTACGACGACTGGGGCCGTCTGG TGGAGGTCGCGATGCTGCCGGAAGGAAGAACGGACGAGGCGGCAACGCTGCAGGCCCTCATCACCCGCTTCGAATACGAA CAGCCCCAGCAGGATGCAGGCACCGGCGCGGTGACATTCCCACCCCACACGCTCGCCTGGTGCGACCAGCCCGTGGCGGT GATCGACGCGCAAGGCGGGCGCAGCCAGTACGCGTACAACGCCTGCGGCCAAATCACGCGGCACACCGACTGCTCCGGCC ACAGCCAGACATGGCGCCACGGTGCATGGGGCGAGGTAGTGGAAGCGGTGGACGCGCTGGGCCAGCGCACACGACTGCAC CACGCGATGCAGCAAGGCGCACTGCGGCTGGTGGGCGTGCAGCAGCCGGGCAACACGGCGGTGCGCTACCGCTGGAACGA AACCGGACGGATGGCGGCCATCACCCACGGCACGCACGACGTGCTGGAAGGCACGGGCGAGCCCGCGGGCACCAGCGCCA CCATCGCTTACCGTCACGACCTGTGGGGCCGCGTGGTGGAGCAGGTGCAGGCGGGCCGGGGCGTGCAGCTGCGCTACGAC GTGGCCGGGCGGCTGCAGGAACTCGTCAACGAGAACGGCGACGTGACGCGCTTCGTGCACGATGTGGCCGACCGGCTGGT GCAGGAAGTGGGGTTCGACGGGCGCAGCCAGGTGTATGGCTACGACGCTGCGGGCCAGCTCACGCACACGGGCGATGGAC ACGGGGAAGGCCACCACCCGGGCGCGGCGGCGCGGCCGGAGCTGGGCGCAGTGGTGCGCACGCGGCTGCACTACGACCTG GGTGGCCGACTGGTGGCGCGTGTCGCCGTGCGGCTGCCGGCCCCGGAGCCCTCCGATACCGAACCCCACGCGATACTGCA GATCCAGCGCTTCGAACACACTTCAGCCGGGGCGTTGCAGCAGACGCGAACCTGGGAGGCCGAGTTGCCGCACGGCGTCG AACCCATGGCATCGCCCACGGGTTCCATGACCGACCGCCCCATGTCCCTGGCTGGCAGCTGGCTGGCGCTGAATACGCAG GCCCTGTTGTCCCTGCTGGACCGCCCGGGCGATCCGGCCCAGGCTCCGCTGGCTGCCGCGCTGCAGGCGCAGCGTCTGCA GCAGGAAGCCCGCGTAGCCTTCGCGCGCGATGCCTTCGGACGGGTCTGCGGAGAGACGCAGACGCTGTACCGAGAGCCGC AGGCGCCCCAACTCCAAGCCAGCCTGAGTGCCGGTGAGCCCCCCGTGGAGTTCGAGCACGCGATTACCCACACCCTGGGC CCGCTGGGCCAGCGCACGGCCACGCAGGCGCAAGGCCTAGGCACGCTGCAGTGGCTGGCCTACGGCTCGGGCCACGTACA CGGGCTGCTGCTGGACGGCCAGCCGCTGGTGGACTGGGAGCGCGATGCGCTGCACCGCGAGGTGGGGCGCACGCTGCACG TGCTCGACGGCCAAGACAACGCAGACCTGCCTGCCATCGTGCATGCGCGGCAGTTGGACCCGATGGGCAGGATGCTGCAC CAGGACTGGCGCGGCCTGCGCCATGCGGCGGCCATGCCGACGACCGATAACGCCAACGACTCCGATACCGGCCCCTCGTA CGCCGCAGGTCGCATCACCCCGGCCCTGGGCCCGCTCCGAACGATCGCGCAGCGACGCTACCAATACGATGCGCTGGGCC AGCTAGTGGGCGTGCAGACACCTGGTGAGGCCACGCGGTACGGTTACGACGCCTGGCAGCGCCTGACTGCAATGCACCGT GCAGGCCCGGAGGGCGAATTGCATGAGCACTGGGTACTGGATGCAGCGGGCAATCGATTGCCCTCGTTCGGAGGCGCTCA GGCGGCAATACCGCACGCAGGTCGGCAGCCAGAGGCATGGGCCCGCGAGGTGCGCGAGAACTTGCATGATGCAGGCTTTG ACCTGCTACGCGCGAACGGTGGTCCAGGCGAGAGCTCGGGCACGGTAACGCACTGGCCAGGCAACCGCATTGGCTGGAGC ACTGTCCAGAGAGCGGACAGCCACCAGAAAGACGCTCTAATCCGCTACCAATATGACGCTTTCGGCAACCGGGTGCAGGT GCTGCATCCTGACGGCAGAATACAACGACTGCATTACGACGCGCTGCACCAGTTGCGCGAAGTGTGTCAACGCGAGCAAC TAGGCGGCGCTTGGCGGCTGATTGCCAGCTACCGGTACGACGCACTTGGCCGTCGCTTGAGCAAGACCGTGTACGACCAA TTGGACCATGGCGGGACGACTACCTATGCGGGATGGGACGGTGACCGACTCATACACACGGAAGGGGCAAAGGGGTTCTT CCATACGCTCTACGAGCCCGGCTCCTTCGTGCCGTTGCTTCGCCTGGAACGCAGCAAAGCCATTCCTACAGCCATGCAGG TGCTGCTGGCGCTGGACAGCACTGAAGATGATGACTCCGACGCCCCTGCTCTGGGCCGCAACTTCTTCGCTGCGTTGCCC AGAGCTCAACGCGACTTGCTTGAAGGTGTTTTGCATAGCGCCATCGGTACCTGCGCTGAGGCTTCGCTCGCGAATCTGTC GTCAAACCTACCCCTTGATGTCCGCGTATTGCTGGCAAATGGTCTTGATGAGATCCGGGGTCGGCGTACCAACTTCGCAC GCGCCGAAGACACTTGCATACGCCACATTCTTTGCGACCACCTGGGCACGCCCATCGCGATGGTGGATGCCAACGGACGC CACTCCGGCCTTCTCACGTGGGCGGCAACATACCATTCGTGGGGCGCTCTTCGGGAGGAATACAACCCGAACGATATCAG TCAACCCATAAGATTCCAGGGTCAACAATTCGACGCGGAAACAGGGCTGCATTATAATCGATTAAGATATTATGATCCTT CATTGGGACAATATTTAACTCAGGACCCAATAGGACTTTTGGGCGGAAACGATAAATATATATACCCTGTTTCGCCCACT GGGTGGATTGATCCGACAGGGCTGAATCCACTCGCAGCTTGCGCCGTACCAGGTCCCACTATGGCAGCATGCGCTGTCGC TGCAGAAAAAGCGATGAGTTTATTGGCTCTTGGAACAGCAGCTTTGGCAACGGCAATGATTCCGAGCTCTACATCACAGA TGAGCGATGCTGAAAGATTGAGTTCTGCTCATGAAGCAGCCATGGGCAATCGCACGGCTCCAGGTTATGGTGGAAATTGC TCTCCAGAAGAACATGATGCATTGAGAGATAAAAAAGAAAAAGCATGCGACGACGCCAAGGGATTAAGCTGCCAAAAAGG AGAATTAAATTATGGTAAAGCAGAGAAAATACAAAAATGTATTGATGCGAGAATAAATATAGCCCGCAAGTGCTTCGCTG GCGGAGACGCGGGGCATAACGAACAAATAAATCAATTATTTAGAATCATAGGAAAGTGCACAGGCCATAATGCAAGATAA
Upstream 100 bases:
>100_bases TGATCAATTAGAGAAATTTATGATCCCGGCCGTTCGAAATGAACTCAGCCGCAACCCGGGAGGTTGCGCTCTATAAAGAT AACTGACGAGGGGTATAACC
Downstream 100 bases:
>100_bases CCAGCAAAGGATAGAAGAAATTTTATCCGAGAGAAGACGCCATATATCGACAGCCCCCTCCCTAAGCGAACGTTATGAAA TTCTGCTGAAAGAAACATTT
Product: YD repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1679; Mature: 1678
Protein sequence:
>1679_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSST PAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ QGRVAGITDGSGRRYALRYERIAPDATAARKPGKPDEGGRARHPLLGPDDGVRLVGVDCTFNPLDPAVIPGAAPRPQPLV GYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFF DYGGAPVAAGDGPAASVRSSTVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRY DGAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYE QPQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLH HAMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRYD VAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDL GGRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGALQQTRTWEAELPHGVEPMASPTGSMTDRPMSLAGSWLALNTQ ALLSLLDRPGDPAQAPLAAALQAQRLQQEARVAFARDAFGRVCGETQTLYREPQAPQLQASLSAGEPPVEFEHAITHTLG PLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLDGQDNADLPAIVHARQLDPMGRMLH QDWRGLRHAAAMPTTDNANDSDTGPSYAAGRITPALGPLRTIAQRRYQYDALGQLVGVQTPGEATRYGYDAWQRLTAMHR AGPEGELHEHWVLDAAGNRLPSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWS TVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLREVCQREQLGGAWRLIASYRYDALGRRLSKTVYDQ LDHGGTTTYAGWDGDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALGRNFFAALP RAQRDLLEGVLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTNFARAEDTCIRHILCDHLGTPIAMVDANGR HSGLLTWAATYHSWGALREEYNPNDISQPIRFQGQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPT GWIDPTGLNPLAACAVPGPTMAACAVAAEKAMSLLALGTAALATAMIPSSTSQMSDAERLSSAHEAAMGNRTAPGYGGNC SPEEHDALRDKKEKACDDAKGLSCQKGELNYGKAEKIQKCIDARINIARKCFAGGDAGHNEQINQLFRIIGKCTGHNAR
Sequences:
>Translated_1679_residues MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVY SSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSST PAELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ QGRVAGITDGSGRRYALRYERIAPDATAARKPGKPDEGGRARHPLLGPDDGVRLVGVDCTFNPLDPAVIPGAAPRPQPLV GYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFF DYGGAPVAAGDGPAASVRSSTVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRY DGAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYE QPQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLH HAMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRYD VAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDL GGRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGALQQTRTWEAELPHGVEPMASPTGSMTDRPMSLAGSWLALNTQ ALLSLLDRPGDPAQAPLAAALQAQRLQQEARVAFARDAFGRVCGETQTLYREPQAPQLQASLSAGEPPVEFEHAITHTLG PLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLDGQDNADLPAIVHARQLDPMGRMLH QDWRGLRHAAAMPTTDNANDSDTGPSYAAGRITPALGPLRTIAQRRYQYDALGQLVGVQTPGEATRYGYDAWQRLTAMHR AGPEGELHEHWVLDAAGNRLPSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWS TVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLREVCQREQLGGAWRLIASYRYDALGRRLSKTVYDQ LDHGGTTTYAGWDGDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALGRNFFAALP RAQRDLLEGVLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTNFARAEDTCIRHILCDHLGTPIAMVDANGR HSGLLTWAATYHSWGALREEYNPNDISQPIRFQGQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPT GWIDPTGLNPLAACAVPGPTMAACAVAAEKAMSLLALGTAALATAMIPSSTSQMSDAERLSSAHEAAMGNRTAPGYGGNC SPEEHDALRDKKEKACDDAKGLSCQKGELNYGKAEKIQKCIDARINIARKCFAGGDAGHNEQINQLFRIIGKCTGHNAR >Mature_1678_residues SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTGGDELDFALPGPLPLAWQRVYS SYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDASGRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTP AELLPWAQQPRWSHVPAVLRADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQQ GRVAGITDGSGRRYALRYERIAPDATAARKPGKPDEGGRARHPLLGPDDGVRLVGVDCTFNPLDPAVIPGAAPRPQPLVG YRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQGPRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFD YGGAPVAAGDGPAASVRSSTVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRYD GAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLPEGRTDEAATLQALITRFEYEQ PQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYNACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLHH AMQQGALRLVGVQQPGNTAVRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRYDV AGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHPGAAARPELGAVVRTRLHYDLG GRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGALQQTRTWEAELPHGVEPMASPTGSMTDRPMSLAGSWLALNTQA LLSLLDRPGDPAQAPLAAALQAQRLQQEARVAFARDAFGRVCGETQTLYREPQAPQLQASLSAGEPPVEFEHAITHTLGP LGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLDGQDNADLPAIVHARQLDPMGRMLHQ DWRGLRHAAAMPTTDNANDSDTGPSYAAGRITPALGPLRTIAQRRYQYDALGQLVGVQTPGEATRYGYDAWQRLTAMHRA GPEGELHEHWVLDAAGNRLPSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWST VQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLREVCQREQLGGAWRLIASYRYDALGRRLSKTVYDQL DHGGTTTYAGWDGDRLIHTEGAKGFFHTLYEPGSFVPLLRLERSKAIPTAMQVLLALDSTEDDDSDAPALGRNFFAALPR AQRDLLEGVLHSAIGTCAEASLANLSSNLPLDVRVLLANGLDEIRGRRTNFARAEDTCIRHILCDHLGTPIAMVDANGRH SGLLTWAATYHSWGALREEYNPNDISQPIRFQGQQFDAETGLHYNRLRYYDPSLGQYLTQDPIGLLGGNDKYIYPVSPTG WIDPTGLNPLAACAVPGPTMAACAVAAEKAMSLLALGTAALATAMIPSSTSQMSDAERLSSAHEAAMGNRTAPGYGGNCS PEEHDALRDKKEKACDDAKGLSCQKGELNYGKAEKIQKCIDARINIARKCFAGGDAGHNEQINQLFRIIGKCTGHNAR
Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RHS family [H]
Homologues:
Organism=Escherichia coli, GI1786706, Length=803, Percent_Identity=35.6164383561644, Blast_Score=365, Evalue=1e-101, Organism=Escherichia coli, GI1786917, Length=828, Percent_Identity=34.6618357487923, Blast_Score=358, Evalue=2e-99, Organism=Escherichia coli, GI1790020, Length=828, Percent_Identity=34.5410628019324, Blast_Score=353, Evalue=5e-98, Organism=Escherichia coli, GI48994942, Length=828, Percent_Identity=34.5410628019324, Blast_Score=353, Evalue=7e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001826 - InterPro: IPR022385 - InterPro: IPR006530 [H]
Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]
EC number: NA
Molecular weight: Translated: 181062; Mature: 180931
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECC GRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTPAELLPWAQQPRWSHVPAVL CCEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHE RADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ ECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC QGRVAGITDGSGRRYALRYERIAPDATAARKPGKPDEGGRARHPLLGPDDGVRLVGVDCT CCCEEEEECCCCCEEEEEEHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE FNPLDPAVIPGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQG CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCC PRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGPAASVRSS CCCCEEECCCCHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHCCCCEEECCCCCCHHHHHH TVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRY HHHHHHCCCCEEEEECCCCHHHHHHEECCCCCCHHHHCCHHCCCEEEHHHHHCCCEEEEE DGAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLP CCCCCEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHEEEEEECC EGRTDEAATLQALITRFEYEQPQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYN CCCCCHHHHHHHHHHHHHCCCCCHHCCCCEEECCCCHHHHCCCCEEEEECCCCCCCHHHH ACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLHHAMQQGALRLVGVQQPGNTA HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCE VRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRYD EEEEECCCCCEEEEECCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEH VAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCC GAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGALQ CCCCCCHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHH QTRTWEAELPHGVEPMASPTGSMTDRPMSLAGSWLALNTQALLSLLDRPGDPAQAPLAAA HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECHHHHHHHHHCCCCCCCHHHHHH LQAQRLQQEARVAFARDAFGRVCGETQTLYREPQAPQLQASLSAGEPPVEFEHAITHTLG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHC PLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLDGQDN CCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCC ADLPAIVHARQLDPMGRMLHQDWRGLRHAAAMPTTDNANDSDTGPSYAAGRITPALGPLR CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TIAQRRYQYDALGQLVGVQTPGEATRYGYDAWQRLTAMHRAGPEGELHEHWVLDAAGNRL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCC PSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCHH TVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLREVCQREQLGGAWRL HHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH IASYRYDALGRRLSKTVYDQLDHGGTTTYAGWDGDRLIHTEGAKGFFHTLYEPGSFVPLL HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCHHHHHHCCCCCCCHHH RLERSKAIPTAMQVLLALDSTEDDDSDAPALGRNFFAALPRAQRDLLEGVLHSAIGTCAE HHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ASLANLSSNLPLDVRVLLANGLDEIRGRRTNFARAEDTCIRHILCDHLGTPIAMVDANGR HHHHHHCCCCCEEEEEHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC HSGLLTWAATYHSWGALREEYNPNDISQPIRFQGQQFDAETGLHYNRLRYYDPSLGQYLT CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHCCCEECCCCCCCCCEEEEECCHHHHHHH QDPIGLLGGNDKYIYPVSPTGWIDPTGLNPLAACAVPGPTMAACAVAAEKAMSLLALGTA CCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALATAMIPSSTSQMSDAERLSSAHEAAMGNRTAPGYGGNCSPEEHDALRDKKEKACDDAK HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHC GLSCQKGELNYGKAEKIQKCIDARINIARKCFAGGDAGHNEQINQLFRIIGKCTGHNAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGKPAARQGDLTKKGGPIVQGSATVLIGSAGGVACSVCPGGMAVGNPVNPALGAKVLTG CCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEC GDELDFALPGPLPLAWQRVYSSYVNAEHGAACGLLGYGWKLPLELRLVLQDERAVLFDAS CCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEECC GRAITFEEPLQPGQALHSSSEDLWLLRGGGMAGSTAPSSTPAELLPWAQQPRWSHVPAVL CCEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHE RADPGCVIAVPGAGGAGAPVWVFLTAGVSGDGTASGHVLHAVIDRFGRSQRYQWGTEGEQ ECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC QGRVAGITDGSGRRYALRYERIAPDATAARKPGKPDEGGRARHPLLGPDDGVRLVGVDCT CCCEEEEECCCCCEEEEEEHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEE FNPLDPAVIPGAAPRPQPLVGYRYDSAGNLAEVLGADGTVLRRFGYDALHRMTEHQVRQG CCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCC PRHRYVYEDQTAQGRRQGWAARPGARVAEQHNEEGLSYFFDYGGAPVAAGDGPAASVRSS CCCCEEECCCCHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHCCCCEEECCCCCCHHHHHH TVVRDSLGRTTTYHFEGEGGLKRLVRLTGPDGAEQSYRHDSAGRRLSATDALGRTTWWRY HHHHHHCCCCEEEEECCCCHHHHHHEECCCCCCHHHHCCHHCCCEEEHHHHHCCCEEEEE DGAGRLLGVQGPDGRSTQQRWGAAGSAQDGLLLASQDAAGLRTHYRYDDWGRLVEVAMLP CCCCCEEEECCCCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHEEEEEECC EGRTDEAATLQALITRFEYEQPQQDAGTGAVTFPPHTLAWCDQPVAVIDAQGGRSQYAYN CCCCCHHHHHHHHHHHHHCCCCCHHCCCCEEECCCCHHHHCCCCEEEEECCCCCCCHHHH ACGQITRHTDCSGHSQTWRHGAWGEVVEAVDALGQRTRLHHAMQQGALRLVGVQQPGNTA HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCE VRYRWNETGRMAAITHGTHDVLEGTGEPAGTSATIAYRHDLWGRVVEQVQAGRGVQLRYD EEEEECCCCCEEEEECCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEH VAGRLQELVNENGDVTRFVHDVADRLVQEVGFDGRSQVYGYDAAGQLTHTGDGHGEGHHP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCCCCC GAAARPELGAVVRTRLHYDLGGRLVARVAVRLPAPEPSDTEPHAILQIQRFEHTSAGALQ CCCCCCHHHHHHHHHHHHCCCHHEEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHH QTRTWEAELPHGVEPMASPTGSMTDRPMSLAGSWLALNTQALLSLLDRPGDPAQAPLAAA HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEECHHHHHHHHHCCCCCCCHHHHHH LQAQRLQQEARVAFARDAFGRVCGETQTLYREPQAPQLQASLSAGEPPVEFEHAITHTLG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHC PLGQRTATQAQGLGTLQWLAYGSGHVHGLLLDGQPLVDWERDALHREVGRTLHVLDGQDN CCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCEEEEECCCCC ADLPAIVHARQLDPMGRMLHQDWRGLRHAAAMPTTDNANDSDTGPSYAAGRITPALGPLR CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH TIAQRRYQYDALGQLVGVQTPGEATRYGYDAWQRLTAMHRAGPEGELHEHWVLDAAGNRL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCC PSFGGAQAAIPHAGRQPEAWAREVRENLHDAGFDLLRANGGPGESSGTVTHWPGNRIGWS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCHH TVQRADSHQKDALIRYQYDAFGNRVQVLHPDGRIQRLHYDALHQLREVCQREQLGGAWRL HHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH IASYRYDALGRRLSKTVYDQLDHGGTTTYAGWDGDRLIHTEGAKGFFHTLYEPGSFVPLL HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCHHHHHHCCCCCCCHHH RLERSKAIPTAMQVLLALDSTEDDDSDAPALGRNFFAALPRAQRDLLEGVLHSAIGTCAE HHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ASLANLSSNLPLDVRVLLANGLDEIRGRRTNFARAEDTCIRHILCDHLGTPIAMVDANGR HHHHHHCCCCCEEEEEHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC HSGLLTWAATYHSWGALREEYNPNDISQPIRFQGQQFDAETGLHYNRLRYYDPSLGQYLT CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHCCCEECCCCCCCCCEEEEECCHHHHHHH QDPIGLLGGNDKYIYPVSPTGWIDPTGLNPLAACAVPGPTMAACAVAAEKAMSLLALGTA CCCCEEECCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ALATAMIPSSTSQMSDAERLSSAHEAAMGNRTAPGYGGNCSPEEHDALRDKKEKACDDAK HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHC GLSCQKGELNYGKAEKIQKCIDARINIARKCFAGGDAGHNEQINQLFRIIGKCTGHNAR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1766878; 9278503; 2644231; 2403547; 7934896 [H]