Click here to switch to the map view.

The map label for this gene is yefJ [C]

Identifier: 120612778

GI number: 120612778

Start: 4591222

End: 4592010

Strand: Reverse

Name: yefJ [C]

Synonym: Aave_4141

Alternate gene names: 120612778

Gene position: 4592010-4591222 (Counterclockwise)

Preceding gene: 120612780

Following gene: 120612777

Centisome position: 85.79

GC content: 67.43

Gene sequence:

>789_bases
ATGACAACATCATCCCAACCTGGCGGCCTGGCTGTATCGGTCGTCAGCCACGGCCACGGCCCCCTTTTGCATGCCATGCT
GCACGGCATGGCCCGCTGGTGCGCCGGGAGCGTGACGCGGGTCGTGTTGACTCTCAACATACCTGAGCCGGCTCCGCCGC
TGCCGCCGGGGCAGATGGATTGGCCGTTCACGCTGGACATCCGCAGCAATGCCCGGCCTCAGGGGTTCGGCGCCAATCAC
AACGCGGCATTGGACGGGGCCACCGAGGCGTTCGTGGGTGTGCTCAATCCGGACATCGCATTTCTGGGGACTGACCCGTT
CGAGCGGTTGCTCCGCTCGGCATCGGAGCAGGGTGTCGGCTGCGCCTATCCCGAGCAGGTGGACGGCAGCGGCAAGGTCC
AGGACTCCGAACGGGAGCTGCCGACGCCCGGTGCCCTCTGGCGCCGGCGCATTCTCCACCGGCCGGATCGCCGCACGGAC
TGGGTGAACGCGGCTTTCCTGGTGTTTCCCGCCGCTGCCTGGAAGGCGGTAGGGGGGTTCGACGAGCGCTATTTCATGTA
TTGCGAGGACGTGGATCTCTGCCTGCGCCTGCGCCTGATGGGCTGGAAGCTGGCCAGGGTGCCGGTGCGCGTGGGCCATG
TCGGCCAGCGCGCCAGCCGGCACCGGCTGGCCCATCTGGGCTGGCATGTCCGGAGCCTGTTGAGGCTATGGACGTCACCT
GTGTATCACCAGGCGCGACCTTTGTTGCGGGCGGATACCGCTCAAGCGCGTAGGATCGGCGCCCCATGA

Upstream 100 bases:

>100_bases
CATCCAGGGATTATGACGGCCCGCTGATGGGCTGCCGGGGACGTGGCGTGAGCGGTCTCCTACAGAGGTGTCGGCCTCGG
GAGACGACAATACGCGCTTC

Downstream 100 bases:

>100_bases
TCTGGTTGTCTCTGGTCAGTTTCCTGGCAACGGCCCTCGCTGCTGCATGCATCGTCCGTTGGGGGCGAGGCCATGCCGCG
AACTACGGCGATGCCATGCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyltransferase; DTDP-Rhamnosyl Transferase; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Group 2 Family

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTTSSQPGGLAVSVVSHGHGPLLHAMLHGMARWCAGSVTRVVLTLNIPEPAPPLPPGQMDWPFTLDIRSNARPQGFGANH
NAALDGATEAFVGVLNPDIAFLGTDPFERLLRSASEQGVGCAYPEQVDGSGKVQDSERELPTPGALWRRRILHRPDRRTD
WVNAAFLVFPAAAWKAVGGFDERYFMYCEDVDLCLRLRLMGWKLARVPVRVGHVGQRASRHRLAHLGWHVRSLLRLWTSP
VYHQARPLLRADTAQARRIGAP

Sequences:

>Translated_262_residues
MTTSSQPGGLAVSVVSHGHGPLLHAMLHGMARWCAGSVTRVVLTLNIPEPAPPLPPGQMDWPFTLDIRSNARPQGFGANH
NAALDGATEAFVGVLNPDIAFLGTDPFERLLRSASEQGVGCAYPEQVDGSGKVQDSERELPTPGALWRRRILHRPDRRTD
WVNAAFLVFPAAAWKAVGGFDERYFMYCEDVDLCLRLRLMGWKLARVPVRVGHVGQRASRHRLAHLGWHVRSLLRLWTSP
VYHQARPLLRADTAQARRIGAP
>Mature_261_residues
TTSSQPGGLAVSVVSHGHGPLLHAMLHGMARWCAGSVTRVVLTLNIPEPAPPLPPGQMDWPFTLDIRSNARPQGFGANHN
AALDGATEAFVGVLNPDIAFLGTDPFERLLRSASEQGVGCAYPEQVDGSGKVQDSERELPTPGALWRRRILHRPDRRTDW
VNAAFLVFPAAAWKAVGGFDERYFMYCEDVDLCLRLRLMGWKLARVPVRVGHVGQRASRHRLAHLGWHVRSLLRLWTSPV
YHQARPLLRADTAQARRIGAP

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28935; Mature: 28803

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSQPGGLAVSVVSHGHGPLLHAMLHGMARWCAGSVTRVVLTLNIPEPAPPLPPGQMD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCC
WPFTLDIRSNARPQGFGANHNAALDGATEAFVGVLNPDIAFLGTDPFERLLRSASEQGVG
CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC
CAYPEQVDGSGKVQDSERELPTPGALWRRRILHRPDRRTDWVNAAFLVFPAAAWKAVGGF
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DERYFMYCEDVDLCLRLRLMGWKLARVPVRVGHVGQRASRHRLAHLGWHVRSLLRLWTSP
CCCEEEEECCHHHHHHHHHHCCHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCH
VYHQARPLLRADTAQARRIGAP
HHHHHCCHHHHCHHHHHCCCCC
>Mature Secondary Structure 
TTSSQPGGLAVSVVSHGHGPLLHAMLHGMARWCAGSVTRVVLTLNIPEPAPPLPPGQMD
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCC
WPFTLDIRSNARPQGFGANHNAALDGATEAFVGVLNPDIAFLGTDPFERLLRSASEQGVG
CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC
CAYPEQVDGSGKVQDSERELPTPGALWRRRILHRPDRRTDWVNAAFLVFPAAAWKAVGGF
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
DERYFMYCEDVDLCLRLRLMGWKLARVPVRVGHVGQRASRHRLAHLGWHVRSLLRLWTSP
CCCEEEEECCHHHHHHHHHHCCHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCH
VYHQARPLLRADTAQARRIGAP
HHHHHCCHHHHCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA