Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is sfsB [C]
Identifier: 120612753
GI number: 120612753
Start: 4573941
End: 4574213
Strand: Direct
Name: sfsB [C]
Synonym: Aave_4116
Alternate gene names: 120612753
Gene position: 4573941-4574213 (Clockwise)
Preceding gene: 120612717
Following gene: 120612754
Centisome position: 85.45
GC content: 58.24
Gene sequence:
>273_bases ATGACCATGGACACACAAAAATGTATGCAGCCCAAAGACTGGCACCCAGCCGACGTGAAGGCCGCACTTGAAAAGAGAGG TGTGAGTCTTCGGAAACTGGCGAAGACGCACGGCTACTCCCACTTTCAAAGGGTGCTGACAACCCACTGGTGGGCGGCCG AACAGATCGTCGCTGCGGCACTGGGCCTGCGCGCCGAAGAGATCTGGCCGAGCCGCTATGAGGTGTCCAGGGAGAGAGCG AAAAATCGGACGTCTGAAGTTGCCCCGGTTTGA
Upstream 100 bases:
>100_bases AAATCAATCCCGTCCAGCTGACAAGCATTTTTTCGTGTGCCCAATAAACCTATACGTGTTCAAAGATGGTTGGCGCGCAC ACTCATTTGTGTTCATAATC
Downstream 100 bases:
>100_bases CGGACACCTTACGCTGTAGAGCAAGGAGTTCGAAATGGGCAAGACAAGGCCGCCGTATCCGGCGGAGTTCCGAGAGCAGA TAGTGGAGTTGGTGCGAGCT
Product: putative transcriptional regulator, Nlp
Products: NA
Alternate protein names: Regulator For Maltose Metabolism
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTMDTQKCMQPKDWHPADVKAALEKRGVSLRKLAKTHGYSHFQRVLTTHWWAAEQIVAAALGLRAEEIWPSRYEVSRERA KNRTSEVAPV
Sequences:
>Translated_90_residues MTMDTQKCMQPKDWHPADVKAALEKRGVSLRKLAKTHGYSHFQRVLTTHWWAAEQIVAAALGLRAEEIWPSRYEVSRERA KNRTSEVAPV >Mature_89_residues TMDTQKCMQPKDWHPADVKAALEKRGVSLRKLAKTHGYSHFQRVLTTHWWAAEQIVAAALGLRAEEIWPSRYEVSRERAK NRTSEVAPV
Specific function: This Protein Is Involved In Positive Regulation Of The Metabolism Of Sugars. [C]
COG id: COG3423
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10358; Mature: 10227
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDTQKCMQPKDWHPADVKAALEKRGVSLRKLAKTHGYSHFQRVLTTHWWAAEQIVAAA CCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGLRAEEIWPSRYEVSRERAKNRTSEVAPV HCCCHHHHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TMDTQKCMQPKDWHPADVKAALEKRGVSLRKLAKTHGYSHFQRVLTTHWWAAEQIVAAA CCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LGLRAEEIWPSRYEVSRERAKNRTSEVAPV HCCCHHHHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA