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The map label for this gene is ygiF [H]

Identifier: 120612667

GI number: 120612667

Start: 4478183

End: 4479739

Strand: Direct

Name: ygiF [H]

Synonym: Aave_4030

Alternate gene names: 120612667

Gene position: 4478183-4479739 (Clockwise)

Preceding gene: 120612662

Following gene: 120612668

Centisome position: 83.66

GC content: 74.25

Gene sequence:

>1557_bases
ATGGAAATCGAATTCAAGTTCCTGATCCCCGCGCACCGCCTGGAAGGCGTGGAAGCCGCGCTGCAGCAAGGCCCCTTCAC
CGCGTGCCGCATGGAGGCGCATTACTTCGACACGCCCGGGGGCGACCTCGCCCGCCACGGCATCGCATGGCGCGTGCGCA
ACGAAGGCGGGGCCTGGGTGCAGACCGTGAAGACCCTGGGCGACGGGCCGCTGGCGCGCGGAGAGCACAACGCGCCCGTG
CCGCGGCCCGCCGACCCGGCCGGCATTCCCCGCCCCGACCCCACCCTGCATGCCGGCTCCACCGCCGGCCGGCAGCTCGC
CAAAGTGCTGGCGGGCACCCGGGCCGCGCCCGTTGCCACCTACGGCACCGAATTCGAGCGCGTGGCGCGCGACATTCCCC
TGCCGGGTGGCGGGGCGATGGAAGTGGCGCTGGACGTCGGCCGCGTGGTGGCCCGCCGCGGCGGTGCGGACGAGGTGTCC
GAACCCCTCTGCGAGCTGGAACTGGAACTGAAGCAGGGCTCCGTGCCCGCCCTCGTGGCGGCAGCCACCCAGTGGGCCCG
GACGCACGGGCTGGTGCTCAGCACCCTCTCCAAGGCCGAGCGGGGCGAGCGCCTGCGGGCCGGGCAGGCCGCCGGCCCGG
CGGCCAAGGCCGGCCCGGTGCGCGTGCCGAAGGGCCGCCTCCCGGCAGGGCAGGACCTGCAGCGGACCGTGGTCGCCCAC
TGCCTGGAGCAGATCCTGGCCAACGCGAGCGAGATCGCGCACGGCCACGTCGGCGAGAAGCACATCCACCAGCTGCGCGT
GGGCCTGCGGCGCCTGCGCACCGCCCTGCGCGAACTCGACCGCGTGGCGCCCGGCCGCTTCGATCCCGCGTGGCAGACGC
CCCTGCGCTCCGCCTTCCGCCGCCTGGGCTCCCTGCGGGACGGCGGGCACGTGATGGAGCAGATCGGCGAGGCCCTCCGC
CAGGCGGGAGCGCCCGCCGTGGACACCGGCAGCGCACCGTCCGAATCCGCGCAACACATCGTGGCCGATGCAGCGTTCCA
GTCCACCCTGATCGCACTGATGGGGTTTGCCGCCACGCCGGGCCGGCCGCCGCAGGCACGCGTCGGCGAGGAATGCGGGC
TGGACGCGGACGCCACCCGGCGCGTGCTGCGCAAGGCCTTGCGCAAGCTGCACCGGGGCCTGGCCGAAGATGCGACCTCG
TTCGCCAGCCTGCCGGCCGAACGTCGCCACGGCGTGCGCAAGCGCATCAAGCGCCTGCGCTACCTGGCCGAATTCCTCGC
GCCGGCGCTCAGGGGCGGCGGCAGGGATTTCCTGCGCCACCTGGAGCCTGCGCAGGAGGCCCTGGGCCGGCTCAACGACG
AGCAGGTGGCACAAGCGCAATACCGCCAGCTCGCGGCGAAACACCCGAAGGCCTGGTTCGCCGTCGGCTGGCTGGCGGCG
CGGCGCGAGTCCCTGCTGGCGGAGTGCGAGCGCGCGCTGCGGCGGCTGAAGGAGGGGCCGGAGGTGCGCAAGGGCGGGTT
CCGCCAGGCCGGAGACGGTGTGAGAATCGAACGATGA

Upstream 100 bases:

>100_bases
CCGCAGCCCCCCCGCCACACCGCCCCGCACCCGGCGGCCGGCTCCATGAAAATCCCGCGTCCCCCCGCGGCGAACATCCG
CACGTTTTCAGAAGGCTCCC

Downstream 100 bases:

>100_bases
GCACTTCGACCTCCTCCTTCCGTTCCGATGCGGACGGTACTTCCGTCGCGACGTATTCCTGGACCGACGTGTCCGGCGAA
CCCGCGGGCGTGGTGCAGAT

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MEIEFKFLIPAHRLEGVEAALQQGPFTACRMEAHYFDTPGGDLARHGIAWRVRNEGGAWVQTVKTLGDGPLARGEHNAPV
PRPADPAGIPRPDPTLHAGSTAGRQLAKVLAGTRAAPVATYGTEFERVARDIPLPGGGAMEVALDVGRVVARRGGADEVS
EPLCELELELKQGSVPALVAAATQWARTHGLVLSTLSKAERGERLRAGQAAGPAAKAGPVRVPKGRLPAGQDLQRTVVAH
CLEQILANASEIAHGHVGEKHIHQLRVGLRRLRTALRELDRVAPGRFDPAWQTPLRSAFRRLGSLRDGGHVMEQIGEALR
QAGAPAVDTGSAPSESAQHIVADAAFQSTLIALMGFAATPGRPPQARVGEECGLDADATRRVLRKALRKLHRGLAEDATS
FASLPAERRHGVRKRIKRLRYLAEFLAPALRGGGRDFLRHLEPAQEALGRLNDEQVAQAQYRQLAAKHPKAWFAVGWLAA
RRESLLAECERALRRLKEGPEVRKGGFRQAGDGVRIER

Sequences:

>Translated_518_residues
MEIEFKFLIPAHRLEGVEAALQQGPFTACRMEAHYFDTPGGDLARHGIAWRVRNEGGAWVQTVKTLGDGPLARGEHNAPV
PRPADPAGIPRPDPTLHAGSTAGRQLAKVLAGTRAAPVATYGTEFERVARDIPLPGGGAMEVALDVGRVVARRGGADEVS
EPLCELELELKQGSVPALVAAATQWARTHGLVLSTLSKAERGERLRAGQAAGPAAKAGPVRVPKGRLPAGQDLQRTVVAH
CLEQILANASEIAHGHVGEKHIHQLRVGLRRLRTALRELDRVAPGRFDPAWQTPLRSAFRRLGSLRDGGHVMEQIGEALR
QAGAPAVDTGSAPSESAQHIVADAAFQSTLIALMGFAATPGRPPQARVGEECGLDADATRRVLRKALRKLHRGLAEDATS
FASLPAERRHGVRKRIKRLRYLAEFLAPALRGGGRDFLRHLEPAQEALGRLNDEQVAQAQYRQLAAKHPKAWFAVGWLAA
RRESLLAECERALRRLKEGPEVRKGGFRQAGDGVRIER
>Mature_518_residues
MEIEFKFLIPAHRLEGVEAALQQGPFTACRMEAHYFDTPGGDLARHGIAWRVRNEGGAWVQTVKTLGDGPLARGEHNAPV
PRPADPAGIPRPDPTLHAGSTAGRQLAKVLAGTRAAPVATYGTEFERVARDIPLPGGGAMEVALDVGRVVARRGGADEVS
EPLCELELELKQGSVPALVAAATQWARTHGLVLSTLSKAERGERLRAGQAAGPAAKAGPVRVPKGRLPAGQDLQRTVVAH
CLEQILANASEIAHGHVGEKHIHQLRVGLRRLRTALRELDRVAPGRFDPAWQTPLRSAFRRLGSLRDGGHVMEQIGEALR
QAGAPAVDTGSAPSESAQHIVADAAFQSTLIALMGFAATPGRPPQARVGEECGLDADATRRVLRKALRKLHRGLAEDATS
FASLPAERRHGVRKRIKRLRYLAEFLAPALRGGGRDFLRHLEPAQEALGRLNDEQVAQAQYRQLAAKHPKAWFAVGWLAA
RRESLLAECERALRRLKEGPEVRKGGFRQAGDGVRIER

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=234, Percent_Identity=30.3418803418803, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 55937; Mature: 55937

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEFKFLIPAHRLEGVEAALQQGPFTACRMEAHYFDTPGGDLARHGIAWRVRNEGGAWV
CCEEEEECCCHHHHHHHHHHHHCCCCHHEEEEHHCCCCCCHHHHHCCCEEEEECCCCHHH
QTVKTLGDGPLARGEHNAPVPRPADPAGIPRPDPTLHAGSTAGRQLAKVLAGTRAAPVAT
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH
YGTEFERVARDIPLPGGGAMEVALDVGRVVARRGGADEVSEPLCELELELKQGSVPALVA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AATQWARTHGLVLSTLSKAERGERLRAGQAAGPAAKAGPVRVPKGRLPAGQDLQRTVVAH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
CLEQILANASEIAHGHVGEKHIHQLRVGLRRLRTALRELDRVAPGRFDPAWQTPLRSAFR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RLGSLRDGGHVMEQIGEALRQAGAPAVDTGSAPSESAQHIVADAAFQSTLIALMGFAATP
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GRPPQARVGEECGLDADATRRVLRKALRKLHRGLAEDATSFASLPAERRHGVRKRIKRLR
CCCCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YLAEFLAPALRGGGRDFLRHLEPAQEALGRLNDEQVAQAQYRQLAAKHPKAWFAVGWLAA
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RRESLLAECERALRRLKEGPEVRKGGFRQAGDGVRIER
HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEIEFKFLIPAHRLEGVEAALQQGPFTACRMEAHYFDTPGGDLARHGIAWRVRNEGGAWV
CCEEEEECCCHHHHHHHHHHHHCCCCHHEEEEHHCCCCCCHHHHHCCCEEEEECCCCHHH
QTVKTLGDGPLARGEHNAPVPRPADPAGIPRPDPTLHAGSTAGRQLAKVLAGTRAAPVAT
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHH
YGTEFERVARDIPLPGGGAMEVALDVGRVVARRGGADEVSEPLCELELELKQGSVPALVA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AATQWARTHGLVLSTLSKAERGERLRAGQAAGPAAKAGPVRVPKGRLPAGQDLQRTVVAH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
CLEQILANASEIAHGHVGEKHIHQLRVGLRRLRTALRELDRVAPGRFDPAWQTPLRSAFR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RLGSLRDGGHVMEQIGEALRQAGAPAVDTGSAPSESAQHIVADAAFQSTLIALMGFAATP
HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GRPPQARVGEECGLDADATRRVLRKALRKLHRGLAEDATSFASLPAERRHGVRKRIKRLR
CCCCHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
YLAEFLAPALRGGGRDFLRHLEPAQEALGRLNDEQVAQAQYRQLAAKHPKAWFAVGWLAA
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RRESLLAECERALRRLKEGPEVRKGGFRQAGDGVRIER
HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]