Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612635
Identifier: 120612635
GI number: 120612635
Start: 4433882
End: 4434802
Strand: Reverse
Name: 120612635
Synonym: Aave_3997
Alternate gene names: NA
Gene position: 4434802-4433882 (Counterclockwise)
Preceding gene: 120612643
Following gene: 120612634
Centisome position: 82.85
GC content: 72.1
Gene sequence:
>921_bases ATGCCGCCCCTTTTGGCGGCCCGCGCGAACCCACCCATGCCCATCATCGTCAACGAAGAACTCAAGGCCTACATCGATCC GCTCACGCCCGAGGAGCATGCCGCCCTGGAGCGCAGCCTGCTCGCCGAAGGCTGCCGCGATGCACTCGTGCTCTGGGGCG ACGTGCTCGTGGACGGTCACAACCGCTATGGCATCTGCCAGAAGCACGGGCTGCCGTTCAACACCGTCCAGCATCCGCAT TTCCGCTCCATGGAAGACGTGCATCTCTGGATGATCGACCAGCACCTCGGCCGCCGCAGCGTCTCGGACTTCCAGCGCGG CGTGCTGGCGCTGCGCAAGCGGGAAATCCTGGCGCAGCGCGTGGCCGCCACTGCGCCCGCCGCTGCCCAGGGCTCCGGAG CGGCGGAGCCCGCGGACGGTGCCGCGCCGTGGGAGGGGCCGGCCGATACCGGCTCCGCCGCGCCGCAGGACGCCGCCGCG GGGGTGCCGGAGGCCGAGCCGCTGAAGAGCCGCGAAGCCATCGCCCGGGCGGCACGCCTGAGCAGCAGCCAGGTGGTGAT GATCGAGAAGATCCAGAAGCAGGCCGCGCCCGAACTGGTGGCTGCCGTGCGCTCGGGCTCCATCTCCATCAACACCGCGG CCGCCGTGGCCACCTTGCCCGAAGAAGAGCAGCGCGCCGCGGCGGTGGCCGGCAAGGATGAGCTGCGCCAGGCCGCGAAG CGCGCGCGCGACGCACGCCGCAGGCCACGTGCGGAGATTCCGCAGGATGGATCCGCGCCGGAGCGCGCCACCGAACCGGG CGGGCCGTCCGCGCCCCGGGACGACGTCGAGGCGCTGCGCCGCCGCGTGGCAGAGCTTTCCGCCGAGAACGAAGCCCTGC GCGCGGAAGTGGCTCGACTGCAGGCACTGGCGGGAGCGTAA
Upstream 100 bases:
>100_bases AGGGACGGCCGGGCAATCGGATGCATGGCCGCATTGTCGGTCCGCCGGAGGGGGGCGTGCCGTCGCGCTGCGGAATGCCG GCGCGCGCGCATTCACTACA
Downstream 100 bases:
>100_bases GGCCCTGCGCGGGACGGCTGCTCCTTCTTTTGCAGGATATGGCCTACGTGCGCGGCGGTGTCCGCACCCTATGATCCGGT GCTTCCCGTCCCGCACCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPPLLAARANPPMPIIVNEELKAYIDPLTPEEHAALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFNTVQHPH FRSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILAQRVAATAPAAAQGSGAAEPADGAAPWEGPADTGSAAPQDAAA GVPEAEPLKSREAIARAARLSSSQVVMIEKIQKQAAPELVAAVRSGSISINTAAAVATLPEEEQRAAAVAGKDELRQAAK RARDARRRPRAEIPQDGSAPERATEPGGPSAPRDDVEALRRRVAELSAENEALRAEVARLQALAGA
Sequences:
>Translated_306_residues MPPLLAARANPPMPIIVNEELKAYIDPLTPEEHAALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFNTVQHPH FRSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILAQRVAATAPAAAQGSGAAEPADGAAPWEGPADTGSAAPQDAAA GVPEAEPLKSREAIARAARLSSSQVVMIEKIQKQAAPELVAAVRSGSISINTAAAVATLPEEEQRAAAVAGKDELRQAAK RARDARRRPRAEIPQDGSAPERATEPGGPSAPRDDVEALRRRVAELSAENEALRAEVARLQALAGA >Mature_305_residues PPLLAARANPPMPIIVNEELKAYIDPLTPEEHAALERSLLAEGCRDALVLWGDVLVDGHNRYGICQKHGLPFNTVQHPHF RSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILAQRVAATAPAAAQGSGAAEPADGAAPWEGPADTGSAAPQDAAAG VPEAEPLKSREAIARAARLSSSQVVMIEKIQKQAAPELVAAVRSGSISINTAAAVATLPEEEQRAAAVAGKDELRQAAKR ARDARRRPRAEIPQDGSAPERATEPGGPSAPRDDVEALRRRVAELSAENEALRAEVARLQALAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32604; Mature: 32473
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLLAARANPPMPIIVNEELKAYIDPLTPEEHAALERSLLAEGCRDALVLWGDVLVDGH CCCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC NRYGICQKHGLPFNTVQHPHFRSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILAQR CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAATAPAAAQGSGAAEPADGAAPWEGPADTGSAAPQDAAAGVPEAEPLKSREAIARAARL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHC SSSQVVMIEKIQKQAAPELVAAVRSGSISINTAAAVATLPEEEQRAAAVAGKDELRQAAK CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCHHHHHHHHCCHHHHHHHHH RARDARRRPRAEIPQDGSAPERATEPGGPSAPRDDVEALRRRVAELSAENEALRAEVARL HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH QALAGA HHHHCC >Mature Secondary Structure PPLLAARANPPMPIIVNEELKAYIDPLTPEEHAALERSLLAEGCRDALVLWGDVLVDGH CCCCCCCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCC NRYGICQKHGLPFNTVQHPHFRSMEDVHLWMIDQHLGRRSVSDFQRGVLALRKREILAQR CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VAATAPAAAQGSGAAEPADGAAPWEGPADTGSAAPQDAAAGVPEAEPLKSREAIARAARL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHC SSSQVVMIEKIQKQAAPELVAAVRSGSISINTAAAVATLPEEEQRAAAVAGKDELRQAAK CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCHHHHHHHHCCHHHHHHHHH RARDARRRPRAEIPQDGSAPERATEPGGPSAPRDDVEALRRRVAELSAENEALRAEVARL HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH QALAGA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA