Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is rhtB [H]

Identifier: 120612554

GI number: 120612554

Start: 4337190

End: 4337828

Strand: Reverse

Name: rhtB [H]

Synonym: Aave_3915

Alternate gene names: 120612554

Gene position: 4337828-4337190 (Counterclockwise)

Preceding gene: 120612561

Following gene: 120612553

Centisome position: 81.04

GC content: 72.93

Gene sequence:

>639_bases
ATGGACTTCCACACCTGGCTCGCCTTCGCCGCCGCCGCCTGCCTCATCGCCCTCTCGCCCGGCTCGGGGGCCGTGCTGTC
CATGAGCCACGGGCTGGCCTACGGCGTGCGCCGCACGGGCGCGACCATCCTCGGCCTGCAGCTGGGCCTGCTGCTCGTGC
TGGTGATCGCCGGTGCCGGCGTGGGCTCGCTGCTGCTGGCGTCCGAGACCGCGTTCAGCGCGGTGAAGGTGATGGGCGCG
TGCTACCTGATCTATCTCGGGTTCACCCAGTGGCGCGCGGGCGGCGCCTCGGTGTTCGGCGACGAAGGGGCCGCCCCCGC
CGCCTCCTGGCGCCGCCGCTGCGCCGCCGGCTTCCTCACCAACGCCACCAACCCCAAGGGCATCATCTTCATGGTCGCGG
TGCTGCCGCAGTTCCTGACGGAGTCGCGGCCCCTGTGGACGCAACTGCTCGCGCTGGGCGCCACCATGGTCGTGGTGGAC
CTCACCGTCATGCACGGCTATGCCGCCAGCGCCAGCGCGCTGCGGCGGCTGCTGCGCAGCCCCCGGGCGGTACGCAACCA
GAACCGCGTCTTCGGCGGCCTGCTCATGGCCGTGGGCGCCGGGCTGTTCTTCGTGCGACGCGGCGGGCAGCACGCCTGA

Upstream 100 bases:

>100_bases
AGAGGGGGGCGCCGGCGCATTGTGCCCGTTAACATGCTCCACCGTGTCGGCGGCCATGCCGGCGCGGCATCCCCTTTCCA
TTTTCTCCTGCTGCCTTCCC

Downstream 100 bases:

>100_bases
CGGCGCCGAATTGGCCGAAGACGGTTTGCGCCGTCACGCCGTGGCGCTACCATCGGCGTCCCGTCGAACGAGTTCGCCAT
CGAGGAGTCGCACATGCCCG

Product: lysine exporter protein LysE/YggA

Products: homoserine lactone [Periplasm]; Proton [Cytoplasm]; homoserine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDFHTWLAFAAAACLIALSPGSGAVLSMSHGLAYGVRRTGATILGLQLGLLLVLVIAGAGVGSLLLASETAFSAVKVMGA
CYLIYLGFTQWRAGGASVFGDEGAAPAASWRRRCAAGFLTNATNPKGIIFMVAVLPQFLTESRPLWTQLLALGATMVVVD
LTVMHGYAASASALRRLLRSPRAVRNQNRVFGGLLMAVGAGLFFVRRGGQHA

Sequences:

>Translated_212_residues
MDFHTWLAFAAAACLIALSPGSGAVLSMSHGLAYGVRRTGATILGLQLGLLLVLVIAGAGVGSLLLASETAFSAVKVMGA
CYLIYLGFTQWRAGGASVFGDEGAAPAASWRRRCAAGFLTNATNPKGIIFMVAVLPQFLTESRPLWTQLLALGATMVVVD
LTVMHGYAASASALRRLLRSPRAVRNQNRVFGGLLMAVGAGLFFVRRGGQHA
>Mature_212_residues
MDFHTWLAFAAAACLIALSPGSGAVLSMSHGLAYGVRRTGATILGLQLGLLLVLVIAGAGVGSLLLASETAFSAVKVMGA
CYLIYLGFTQWRAGGASVFGDEGAAPAASWRRRCAAGFLTNATNPKGIIFMVAVLPQFLTESRPLWTQLLALGATMVVVD
LTVMHGYAASASALRRLLRSPRAVRNQNRVFGGLLMAVGAGLFFVRRGGQHA

Specific function: Conducts the efflux of homoserine and homoserine lactone [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994979, Length=200, Percent_Identity=40, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22137; Mature: 22137

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFHTWLAFAAAACLIALSPGSGAVLSMSHGLAYGVRRTGATILGLQLGLLLVLVIAGAG
CCHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VGSLLLASETAFSAVKVMGACYLIYLGFTQWRAGGASVFGDEGAAPAASWRRRCAAGFLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
NATNPKGIIFMVAVLPQFLTESRPLWTQLLALGATMVVVDLTVMHGYAASASALRRLLRS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
PRAVRNQNRVFGGLLMAVGAGLFFVRRGGQHA
CHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDFHTWLAFAAAACLIALSPGSGAVLSMSHGLAYGVRRTGATILGLQLGLLLVLVIAGAG
CCHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VGSLLLASETAFSAVKVMGACYLIYLGFTQWRAGGASVFGDEGAAPAASWRRRCAAGFLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
NATNPKGIIFMVAVLPQFLTESRPLWTQLLALGATMVVVDLTVMHGYAASASALRRLLRS
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
PRAVRNQNRVFGGLLMAVGAGLFFVRRGGQHA
CHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; homoserine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + homoserine lactone [Cytoplasm] = Proton [Cytoplasm] + homoserine lactone [Periplasm] Proton [Periplasm] + homoserine [Cytoplasm] = Proton [Cytoplasm] + homoserine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]