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The map label for this gene is ctaG [H]

Identifier: 120612544

GI number: 120612544

Start: 4327722

End: 4328339

Strand: Reverse

Name: ctaG [H]

Synonym: Aave_3905

Alternate gene names: 120612544

Gene position: 4328339-4327722 (Counterclockwise)

Preceding gene: 120612545

Following gene: 120612543

Centisome position: 80.86

GC content: 67.31

Gene sequence:

>618_bases
ATGAGCCGCCGCCGCGAGAATTTCCGCATGGTGGGCAAGCTGGCCGTGATCTCGGTCGGCATGTTCGCGTTCGGCTACGT
GCTCATCCCCATCTACAAGCACATCTGCGAGGTCACGGGCATCAACATCCTGTCGCTGTCGGAGCGCCAGGTGCCCGGCA
ACGGCGTGGCGGGCCGCGACGTGAAGCTGCCCGCGAACACGCAGGTGGATACCAGCCGCACGATCACCGTCGAATTCGAT
GCCAATGCGCGCGGCCCCTGGGACTTCAAGCCCGCCCGCTCCTCGGTCCGGGTGCATCCGGGCGAGCTCACCACCGTGAT
GTACGAATTCCAGAACGTGCAGAACCGCCGCATGGCGGCCCAGGCGATCCCGAGCTACGCGCCCCGGCAGGCGGCGGCGC
ACTTCAACAAGCTCGAATGCTTCTGCTTCAACCAGTACACGCTCGAGCCCGGCGAGAAGCGCGAATGGCCGGTGGCCTTC
GTGGTCGATCCGCGCCTGCCCAAGGACGTGACCACGATCACGCTGTCCTATACGTTCTTCGAGGTCGGCGGCAAGACGCC
CCCGGCGCCCGCCACCGTGTCCGCGGCGCCGCGGGCCCGCGAGGAGGACGGCTCATGA

Upstream 100 bases:

>100_bases
TCCACGGCGTCTGGCGTGGCCTGCTCCGCGGCCATCGGAGGAACGAGGCCGCGTCGGTTGCTTGCGCACTGCGGACCGTG
CGGCAGGGGAGTGCGGCCCG

Downstream 100 bases:

>100_bases
CGGGATCGCGCCACGAACCCCGGCATGCCGCGCCAACCGCACGCCCCGGATCGCTGTGGCGCACGGTGCGCGCCGTGGCA
TGGTCGCTGCTGGGCATCCG

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSRRRENFRMVGKLAVISVGMFAFGYVLIPIYKHICEVTGINILSLSERQVPGNGVAGRDVKLPANTQVDTSRTITVEFD
ANARGPWDFKPARSSVRVHPGELTTVMYEFQNVQNRRMAAQAIPSYAPRQAAAHFNKLECFCFNQYTLEPGEKREWPVAF
VVDPRLPKDVTTITLSYTFFEVGGKTPPAPATVSAAPRAREEDGS

Sequences:

>Translated_205_residues
MSRRRENFRMVGKLAVISVGMFAFGYVLIPIYKHICEVTGINILSLSERQVPGNGVAGRDVKLPANTQVDTSRTITVEFD
ANARGPWDFKPARSSVRVHPGELTTVMYEFQNVQNRRMAAQAIPSYAPRQAAAHFNKLECFCFNQYTLEPGEKREWPVAF
VVDPRLPKDVTTITLSYTFFEVGGKTPPAPATVSAAPRAREEDGS
>Mature_204_residues
SRRRENFRMVGKLAVISVGMFAFGYVLIPIYKHICEVTGINILSLSERQVPGNGVAGRDVKLPANTQVDTSRTITVEFDA
NARGPWDFKPARSSVRVHPGELTTVMYEFQNVQNRRMAAQAIPSYAPRQAAAHFNKLECFCFNQYTLEPGEKREWPVAFV
VDPRLPKDVTTITLSYTFFEVGGKTPPAPATVSAAPRAREEDGS

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=194, Percent_Identity=32.4742268041237, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI242247061, Length=150, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI242247057, Length=141, Percent_Identity=26.241134751773, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71990692, Length=186, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325125, Length=171, Percent_Identity=32.1637426900585, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24581944, Length=186, Percent_Identity=28.494623655914, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 22824; Mature: 22693

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRENFRMVGKLAVISVGMFAFGYVLIPIYKHICEVTGINILSLSERQVPGNGVAGRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCE
VKLPANTQVDTSRTITVEFDANARGPWDFKPARSSVRVHPGELTTVMYEFQNVQNRRMAA
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
QAIPSYAPRQAAAHFNKLECFCFNQYTLEPGEKREWPVAFVVDPRLPKDVTTITLSYTFF
HHCCCCCCHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEEE
EVGGKTPPAPATVSAAPRAREEDGS
EECCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
SRRRENFRMVGKLAVISVGMFAFGYVLIPIYKHICEVTGINILSLSERQVPGNGVAGRD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCE
VKLPANTQVDTSRTITVEFDANARGPWDFKPARSSVRVHPGELTTVMYEFQNVQNRRMAA
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
QAIPSYAPRQAAAHFNKLECFCFNQYTLEPGEKREWPVAFVVDPRLPKDVTTITLSYTFF
HHCCCCCCHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEEE
EVGGKTPPAPATVSAAPRAREEDGS
EECCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA