Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ctaE [H]
Identifier: 120612542
GI number: 120612542
Start: 4326546
End: 4327430
Strand: Reverse
Name: ctaE [H]
Synonym: Aave_3903
Alternate gene names: 120612542
Gene position: 4327430-4326546 (Counterclockwise)
Preceding gene: 120612543
Following gene: 120612541
Centisome position: 80.84
GC content: 65.88
Gene sequence:
>885_bases ATGAGTGCATCCACCCCCCAGGGCACCACGCCGTACTACTACGTTCCCGCCGAGTCGCGCCATCCGGCCATGGCCGCCGC GGGCCTCTTCTTCGTGATCCTCGGTGCCGGCCAGTGGATCAACGGCCACGACTGGGGCAAGTATTCGCTGTTCTTCGGCC TCGCCTGGTGGCTGTTCGTGCTCTACCAGTGGTTCCGCGACGCGGCCCGCGAAAGCGAGGGGGGCCTCTACAGCCGCAAG ATCGACCTCTCGTACCGCTGGAGCATGAGCTGGTTCATCTTCTCCGAGGTGATGTTCTTCGGCGCCTTCTTCACCGCCCT GTGGTGGGCGCGCTCGCATTCCGTGCCGGCGCTGGGTAGCCTCGACAACGCGCTGCTCTGGCCCGACTTCAAGGCCGTGT GGCCCAGCATGGCCGCGGGCGCCACGGCCTCGCCCGCCGGCATCGTCGAGCCCTTCCAGACCGTGGGTCCCTTCTGGCTG CCCACCATCAACACCGCGCTGCTGCTGACCTCGGGCGTCACCCTCACCATCGCCCACCATGCCCTGCGCGAAAGCCACCG CGCGCGCGCCATCGGCTTCATGTGGGTCACCGTGGTCCTCGGCTTCGTGTTCCTCTGCGTGCAGGGCTACGAATACTTCC ACCTCTACACCGAGCTGAACCTCAAGCTCAGCTCCGGCGTCTTCGGCTCCACGTTCTTCATGCTGACGGGTTTCCACGGC TTCCACGTCTTCGTGGGCATGCTGATGCTGCTGTTCATCACCCTGCGGCTGCAGAAGGGCCACTTCACCGCCGAGCGCCA CTTCGGCTTCGAGGGCGCCGCCTGGTACTGGCACTTCGTGGACGTGGTGTGGCTGGGCCTGTACGTGCTGGTCTACTGGC TCTGA
Upstream 100 bases:
>100_bases GGCCTCATCGCCCTCGTGAACTGGGTGGTGTAGCCGCCCGGTGCGAACCCGATCCCGAGAAGACGACAGACGACAAGAAG GAAAGAGACAGGAGCCAGCC
Downstream 100 bases:
>100_bases ACCCGCACCTGTCCCCGCAGGAAAGCGCCTCCGGGCGCTTTTTTTGCCTCCGGGGCCGGTGGGGTGGAGGAGGGGTCAGC GCCCGACGGGCAAGCCGGTG
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSASTPQGTTPYYYVPAESRHPAMAAAGLFFVILGAGQWINGHDWGKYSLFFGLAWWLFVLYQWFRDAARESEGGLYSRK IDLSYRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWL PTINTALLLTSGVTLTIAHHALRESHRARAIGFMWVTVVLGFVFLCVQGYEYFHLYTELNLKLSSGVFGSTFFMLTGFHG FHVFVGMLMLLFITLRLQKGHFTAERHFGFEGAAWYWHFVDVVWLGLYVLVYWL
Sequences:
>Translated_294_residues MSASTPQGTTPYYYVPAESRHPAMAAAGLFFVILGAGQWINGHDWGKYSLFFGLAWWLFVLYQWFRDAARESEGGLYSRK IDLSYRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWL PTINTALLLTSGVTLTIAHHALRESHRARAIGFMWVTVVLGFVFLCVQGYEYFHLYTELNLKLSSGVFGSTFFMLTGFHG FHVFVGMLMLLFITLRLQKGHFTAERHFGFEGAAWYWHFVDVVWLGLYVLVYWL >Mature_293_residues SASTPQGTTPYYYVPAESRHPAMAAAGLFFVILGAGQWINGHDWGKYSLFFGLAWWLFVLYQWFRDAARESEGGLYSRKI DLSYRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGSLDNALLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWLP TINTALLLTSGVTLTIAHHALRESHRARAIGFMWVTVVLGFVFLCVQGYEYFHLYTELNLKLSSGVFGSTFFMLTGFHGF HVFVGMLMLLFITLRLQKGHFTAERHFGFEGAAWYWHFVDVVWLGLYVLVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=233, Percent_Identity=42.0600858369099, Blast_Score=155, Evalue=5e-38, Organism=Escherichia coli, GI1786633, Length=174, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6226542, Length=231, Percent_Identity=33.7662337662338, Blast_Score=108, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 33506; Mature: 33375
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASTPQGTTPYYYVPAESRHPAMAAAGLFFVILGAGQWINGHDWGKYSLFFGLAWWLFV CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LYQWFRDAARESEGGLYSRKIDLSYRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGS HHHHHHHHHCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDNALLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWLPTINTALLLTSGVTLTIAHH CCCCEECCCHHHHCCHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEHHHH ALRESHRARAIGFMWVTVVLGFVFLCVQGYEYFHLYTELNLKLSSGVFGSTFFMLTGFHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCH FHVFVGMLMLLFITLRLQKGHFTAERHFGFEGAAWYWHFVDVVWLGLYVLVYWL HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SASTPQGTTPYYYVPAESRHPAMAAAGLFFVILGAGQWINGHDWGKYSLFFGLAWWLFV CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LYQWFRDAARESEGGLYSRKIDLSYRWSMSWFIFSEVMFFGAFFTALWWARSHSVPALGS HHHHHHHHHCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDNALLWPDFKAVWPSMAAGATASPAGIVEPFQTVGPFWLPTINTALLLTSGVTLTIAHH CCCCEECCCHHHHCCHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEHHHH ALRESHRARAIGFMWVTVVLGFVFLCVQGYEYFHLYTELNLKLSSGVFGSTFFMLTGFHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHCCCH FHVFVGMLMLLFITLRLQKGHFTAERHFGFEGAAWYWHFVDVVWLGLYVLVYWL HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]