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The map label for this gene is scpA [H]

Identifier: 120612480

GI number: 120612480

Start: 4266355

End: 4267206

Strand: Direct

Name: scpA [H]

Synonym: Aave_3839

Alternate gene names: 120612480

Gene position: 4266355-4267206 (Clockwise)

Preceding gene: 120612479

Following gene: 120612481

Centisome position: 79.7

GC content: 66.43

Gene sequence:

>852_bases
ATGAGCGCCGACGCCGTGGATTCCCCGCCGCACGCCGGTGATGCCGCGCAGGATGCCGCCGACAGCGCGGCGGGCGACGC
CGTGGCGCGGCTCTACGGAGAGCCCCTGTTCGCCCTGCCGCAGGACCTCTACATCCCGCCCGACGCGCTGGAAGTGTTCC
TGGAGGCCTTCGAGGGCCCCCTGGACCTGCTGCTCTACCTCATCCGCAAGCAGAATTTCAACATCCTCGACATCCCGATG
CTGGATGTCACGCGGCAGTACCTGGGCTACGTGGACGAGATCCGCAGCCGCAACCTGGAACTGGCGGCCGAATACCTGCT
GATGGCGGCGATGCTCATCGAGATCAAGTCGCGCATGCTGCTGCCGCCCAAGAAGCAGGAAGGCGCCCAGGAGCCGGAAG
ACCCGCGCGCCGAGCTGGTGCGCCGGCTGCTGGAATACGAGCAGATCAAGCTCGCGGCGGCCAACCTGGGCAGGGCTCCG
CAGTACGGCCGTGACTTCCTGCGCGCGCAGGTCCACATCGAGCAGAGCCTGGTGCAGCGGTTTCCCGATGTCCACGTGGC
CGACCTGCAGGAAGCCTGGCGCGACATCCTCAAGCGCGCGAAACTTGTGCAGCACCACCGCATCACCCGCGAAGAGCTGA
GCGTGCGCGAGTACATGAGCGCCGTGCTCAAGACGCTGCAGGGCCGGCGCTTCGTCGAGTTCGAGGAACTGTTCGACCCC
TCCAAAGGCTCCACGGTGCTCGTGGTGACCTTCATCGCCCTGCTGGAGTTGGGCAAGGAAACGCTGATCGAGATCACCCA
GGCGGAAGCCTTCGCGCCCATCTACGTGCGCCTGGCCTACACCCCGGTGTGA

Upstream 100 bases:

>100_bases
CCTACGTGTACCAGACCCAGGCCTGACCGCCCCGGCCCATGGAACGGCAGGCACGCCGGTGCTCCGCGGGCGGCCCGCAC
CATCCGGATGAAGGCAGCGC

Downstream 100 bases:

>100_bases
ACCGCCGCCGCGGCACCGCCCTCCGGCGGACAGCGGCCCCTTCCGACTTCTCTCTCCCCTTCCGAACCGCATGGCCTCCT
TCGATTACGACGTACTCATC

Product: condensin subunit ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MSADAVDSPPHAGDAAQDAADSAAGDAVARLYGEPLFALPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNFNILDIPM
LDVTRQYLGYVDEIRSRNLELAAEYLLMAAMLIEIKSRMLLPPKKQEGAQEPEDPRAELVRRLLEYEQIKLAAANLGRAP
QYGRDFLRAQVHIEQSLVQRFPDVHVADLQEAWRDILKRAKLVQHHRITREELSVREYMSAVLKTLQGRRFVEFEELFDP
SKGSTVLVVTFIALLELGKETLIEITQAEAFAPIYVRLAYTPV

Sequences:

>Translated_283_residues
MSADAVDSPPHAGDAAQDAADSAAGDAVARLYGEPLFALPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNFNILDIPM
LDVTRQYLGYVDEIRSRNLELAAEYLLMAAMLIEIKSRMLLPPKKQEGAQEPEDPRAELVRRLLEYEQIKLAAANLGRAP
QYGRDFLRAQVHIEQSLVQRFPDVHVADLQEAWRDILKRAKLVQHHRITREELSVREYMSAVLKTLQGRRFVEFEELFDP
SKGSTVLVVTFIALLELGKETLIEITQAEAFAPIYVRLAYTPV
>Mature_282_residues
SADAVDSPPHAGDAAQDAADSAAGDAVARLYGEPLFALPQDLYIPPDALEVFLEAFEGPLDLLLYLIRKQNFNILDIPML
DVTRQYLGYVDEIRSRNLELAAEYLLMAAMLIEIKSRMLLPPKKQEGAQEPEDPRAELVRRLLEYEQIKLAAANLGRAPQ
YGRDFLRAQVHIEQSLVQRFPDVHVADLQEAWRDILKRAKLVQHHRITREELSVREYMSAVLKTLQGRRFVEFEELFDPS
KGSTVLVVTFIALLELGKETLIEITQAEAFAPIYVRLAYTPV

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32055; Mature: 31924

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADAVDSPPHAGDAAQDAADSAAGDAVARLYGEPLFALPQDLYIPPDALEVFLEAFEGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCCH
LDLLLYLIRKQNFNILDIPMLDVTRQYLGYVDEIRSRNLELAAEYLLMAAMLIEIKSRML
HHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
LPPKKQEGAQEPEDPRAELVRRLLEYEQIKLAAANLGRAPQYGRDFLRAQVHIEQSLVQR
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FPDVHVADLQEAWRDILKRAKLVQHHRITREELSVREYMSAVLKTLQGRRFVEFEELFDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
SKGSTVLVVTFIALLELGKETLIEITQAEAFAPIYVRLAYTPV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure 
SADAVDSPPHAGDAAQDAADSAAGDAVARLYGEPLFALPQDLYIPPDALEVFLEAFEGP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCCH
LDLLLYLIRKQNFNILDIPMLDVTRQYLGYVDEIRSRNLELAAEYLLMAAMLIEIKSRML
HHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
LPPKKQEGAQEPEDPRAELVRRLLEYEQIKLAAANLGRAPQYGRDFLRAQVHIEQSLVQR
CCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FPDVHVADLQEAWRDILKRAKLVQHHRITREELSVREYMSAVLKTLQGRRFVEFEELFDP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
SKGSTVLVVTFIALLELGKETLIEITQAEAFAPIYVRLAYTPV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]