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The map label for this gene is ynfJ [C]

Identifier: 120612389

GI number: 120612389

Start: 4157755

End: 4158999

Strand: Reverse

Name: ynfJ [C]

Synonym: Aave_3746

Alternate gene names: 120612389

Gene position: 4158999-4157755 (Counterclockwise)

Preceding gene: 120612390

Following gene: 120612388

Centisome position: 77.7

GC content: 73.49

Gene sequence:

>1245_bases
ATGTGGGCCGCGGTGGCCGGGGCGCTGGCGGCGGCGGCCACGGTGGCGTTCCGCGCGCTGGTGCAGGGGGTGGAGCACCT
CGCCACCGGCCATGCCGGCGGTCTGGTGGAGGCTGCACGTTCCCTCTCGCCCTGGCACCGCGTGGTGGTGTGCACCGTGG
GCGGCGTGCTGGCGGGCCTGGTGCTCGAATGGGGTGGCCGCTGGGCGGCGGCCGGCCCGCGTGGCGATGCGCACCTGGAT
TACATCGATGCCGCGCGCGCCGGGCGGGTGGACCTCAACGACCGCACCACGCTCGTGCGTTCGGCATCGGCGCTGTTGTC
GGTGGGCACGGGCGCCTCCATCGGGCGCGAGGGGCCGATGGTGCAGATGGCGGCCTGGCTGGCCGCGTGGCTGGCCCGGG
TAGTGCCGATCGCCCCCGAGCAGCGCAGCGCCCTCATGGTGTGCGGCATCGCCGCCGGCATCGGCTCGGCCTACCACGCG
CCGGTGGCGGGCGTGGTGTTCGTGCTGGAACTGGCGCTCGGCTTTTTCGCACGCCATGCGGTCGCGCCCGTGCTCATCGC
CGCGGGCACCGCCAGCGCGCTCATCCAGTTGCTGGTGGACCCCAAGCCGCTCTACGACGTGCCGGCGGTGGCCGTGGAGC
CGACCAGCCTGGGGCTGGCCCTGGTGGCGGCCGTGCTGTTCGGCGCGGTGGGCTGGACGCTGCTGCACCTGCTGGAAGGC
AGCCGCCGGGCTTTCGGGCGCGTGCGCTCCCTGCCGGCGCGCCTGGGCCTGGGCGGGCTGCTGGTGGGCGGGCTGTCGGC
CTGCGTGCCCGAGGTCTGGGGCAATGGCTACAGCGTCGTGTCGTCGGTGCTGCAGGGCGGCCACCTGTGGCAATGGATCG
TGGTGGTGATGCTGACCAAGATCGTGGCGACGGCGCTGAGTTCGGGCAGCGGCGCCATCGGCGGCGTGTTCACGCCCTCG
CTGTTCGTCGGCGCCACGGCCGGCAGCGTGCTCGCCCAGCTCGCGGCGCTGGCGCTGCCCGCCGCTTGGGTGGGCGACCC
GCGCGCCCTGGCCATCATCGGCATGGCCGCCGTGCTCGCGGCCGTGACCCATGCCCCGCTGATGGCCATCGTGATGGTGC
TGGAGATGACGAACCAGTTCCAGATGACGGTGCCGGTGATGCTGGCCTGCGCGGTAGCGTATGCGGTGAGTACGCAGTTC
GGGGGGCGGCCGTTGTATGGGAATCCGATTGAGGCGAGGCGGTGA

Upstream 100 bases:

>100_bases
CATGCCTCTTCCCGACCCGAACGACATTCCCGCGGCACCGCACCGCCTTGCCGGCCGCTTCCGTCTTCTCGGCCCGGTCG
CCCGCACGCTGCGGTGGTGG

Downstream 100 bases:

>100_bases
GGTGGTGTTTAAGTTCTATCCAGTCTGCTGGGAGTGTGTCTATGACCGATTCAGGCTGAGAGCCACCGCTCGTCGCATGT
GTAGCGAATGGCAGCGTTCG

Product: Cl- channel, voltage-gated family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MWAAVAGALAAAATVAFRALVQGVEHLATGHAGGLVEAARSLSPWHRVVVCTVGGVLAGLVLEWGGRWAAAGPRGDAHLD
YIDAARAGRVDLNDRTTLVRSASALLSVGTGASIGREGPMVQMAAWLAAWLARVVPIAPEQRSALMVCGIAAGIGSAYHA
PVAGVVFVLELALGFFARHAVAPVLIAAGTASALIQLLVDPKPLYDVPAVAVEPTSLGLALVAAVLFGAVGWTLLHLLEG
SRRAFGRVRSLPARLGLGGLLVGGLSACVPEVWGNGYSVVSSVLQGGHLWQWIVVVMLTKIVATALSSGSGAIGGVFTPS
LFVGATAGSVLAQLAALALPAAWVGDPRALAIIGMAAVLAAVTHAPLMAIVMVLEMTNQFQMTVPVMLACAVAYAVSTQF
GGRPLYGNPIEARR

Sequences:

>Translated_414_residues
MWAAVAGALAAAATVAFRALVQGVEHLATGHAGGLVEAARSLSPWHRVVVCTVGGVLAGLVLEWGGRWAAAGPRGDAHLD
YIDAARAGRVDLNDRTTLVRSASALLSVGTGASIGREGPMVQMAAWLAAWLARVVPIAPEQRSALMVCGIAAGIGSAYHA
PVAGVVFVLELALGFFARHAVAPVLIAAGTASALIQLLVDPKPLYDVPAVAVEPTSLGLALVAAVLFGAVGWTLLHLLEG
SRRAFGRVRSLPARLGLGGLLVGGLSACVPEVWGNGYSVVSSVLQGGHLWQWIVVVMLTKIVATALSSGSGAIGGVFTPS
LFVGATAGSVLAQLAALALPAAWVGDPRALAIIGMAAVLAAVTHAPLMAIVMVLEMTNQFQMTVPVMLACAVAYAVSTQF
GGRPLYGNPIEARR
>Mature_414_residues
MWAAVAGALAAAATVAFRALVQGVEHLATGHAGGLVEAARSLSPWHRVVVCTVGGVLAGLVLEWGGRWAAAGPRGDAHLD
YIDAARAGRVDLNDRTTLVRSASALLSVGTGASIGREGPMVQMAAWLAAWLARVVPIAPEQRSALMVCGIAAGIGSAYHA
PVAGVVFVLELALGFFARHAVAPVLIAAGTASALIQLLVDPKPLYDVPAVAVEPTSLGLALVAAVLFGAVGWTLLHLLEG
SRRAFGRVRSLPARLGLGGLLVGGLSACVPEVWGNGYSVVSSVLQGGHLWQWIVVVMLTKIVATALSSGSGAIGGVFTPS
LFVGATAGSVLAQLAALALPAAWVGDPRALAIIGMAAVLAAVTHAPLMAIVMVLEMTNQFQMTVPVMLACAVAYAVSTQF
GGRPLYGNPIEARR

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=415, Percent_Identity=36.8674698795181, Blast_Score=168, Evalue=7e-43,
Organism=Escherichia coli, GI1786350, Length=300, Percent_Identity=28.3333333333333, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 42173; Mature: 42173

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAAVAGALAAAATVAFRALVQGVEHLATGHAGGLVEAARSLSPWHRVVVCTVGGVLAGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLEWGGRWAAAGPRGDAHLDYIDAARAGRVDLNDRTTLVRSASALLSVGTGASIGREGPM
HHHHCCCEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
VQMAAWLAAWLARVVPIAPEQRSALMVCGIAAGIGSAYHAPVAGVVFVLELALGFFARHA
HHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAPVLIAAGTASALIQLLVDPKPLYDVPAVAVEPTSLGLALVAAVLFGAVGWTLLHLLEG
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
SRRAFGRVRSLPARLGLGGLLVGGLSACVPEVWGNGYSVVSSVLQGGHLWQWIVVVMLTK
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
IVATALSSGSGAIGGVFTPSLFVGATAGSVLAQLAALALPAAWVGDPRALAIIGMAAVLA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHH
AVTHAPLMAIVMVLEMTNQFQMTVPVMLACAVAYAVSTQFGGRPLYGNPIEARR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MWAAVAGALAAAATVAFRALVQGVEHLATGHAGGLVEAARSLSPWHRVVVCTVGGVLAGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
VLEWGGRWAAAGPRGDAHLDYIDAARAGRVDLNDRTTLVRSASALLSVGTGASIGREGPM
HHHHCCCEECCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
VQMAAWLAAWLARVVPIAPEQRSALMVCGIAAGIGSAYHAPVAGVVFVLELALGFFARHA
HHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAPVLIAAGTASALIQLLVDPKPLYDVPAVAVEPTSLGLALVAAVLFGAVGWTLLHLLEG
HHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHC
SRRAFGRVRSLPARLGLGGLLVGGLSACVPEVWGNGYSVVSSVLQGGHLWQWIVVVMLTK
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
IVATALSSGSGAIGGVFTPSLFVGATAGSVLAQLAALALPAAWVGDPRALAIIGMAAVLA
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHH
AVTHAPLMAIVMVLEMTNQFQMTVPVMLACAVAYAVSTQFGGRPLYGNPIEARR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]