| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612387
Identifier: 120612387
GI number: 120612387
Start: 4156257
End: 4156943
Strand: Direct
Name: 120612387
Synonym: Aave_3744
Alternate gene names: NA
Gene position: 4156257-4156943 (Clockwise)
Preceding gene: 120612385
Following gene: 120612396
Centisome position: 77.65
GC content: 57.21
Gene sequence:
>687_bases ATGCATATTCGTGACGTTGAACTAACTGGAAAGCTCATGCTGCCAAAGCACTTCTGTTGGACCCGCTTCGGCACCGAAGC TGGTGAAAAAATTGACAGCATCCTTGCCCGTAAGGAACAGGAGCGACTAGCCACTGGTGGCATGTTCCTTTGGGGCATCG GCAACAGCGTTGGCCCCGCCATCCGCGACCTCATCCGCTTGGAAGAGCGCCCCATCGTGCTGTTCTCTCCCATGCGCAGC AAACCCAAGGCCATCGACGTCACACCCTCAGGGCTGACTGTGTGGTCTGAGGCGATCGATCTCGATGGCAGAGATTGGCC TATTCCCGAAGGCGTGAAGGTAACCAGTCGCCAAGGTAGCGAGACAGGCCGCATCAAGCGGTCGCACTACGCGCTGGTCT GCCGCACCTCGTCACCATTGCGCACTCTCGACTTTGCCAACCTTCGCTACGAAGAGCTTGTGAATCTTCAGAGCAAAAAC AAGTTGGGCGCCTCGCAAGTCACGGCAGTTGTCGAACAACGTGCGCGAGGAACGGCGGACTGCACTACCTACCCTGTTGC CTTCATGGCCGAACTGGTCTTTCCCTACTTTGTGAAGCTTGGTGGTCCACTCGACTCTAAAGTGCAGGCTCCCAAGTCAT GCAGCCGCTCCGCCTACCCATACCAGCCTTCGCTGCTTGCTGCGTAA
Upstream 100 bases:
>100_bases AATTTCCGGCTGGGTTTGCCCAATCCTGCCCAGTGTGGCCCGCATCTCCGTCCACTGATCCTTGATGGATTCATTCATAC TTCGTATAATAAACGAATAA
Downstream 100 bases:
>100_bases CACAGCCGGGTCAGAGAGCTAGCGCAGCCACTTCAAGACAGCCTCCGTGAGAGCGTTCGGTGTGGCGCTACTGTCTAAGA AGTAGACAGCTTTACCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MHIRDVELTGKLMLPKHFCWTRFGTEAGEKIDSILARKEQERLATGGMFLWGIGNSVGPAIRDLIRLEERPIVLFSPMRS KPKAIDVTPSGLTVWSEAIDLDGRDWPIPEGVKVTSRQGSETGRIKRSHYALVCRTSSPLRTLDFANLRYEELVNLQSKN KLGASQVTAVVEQRARGTADCTTYPVAFMAELVFPYFVKLGGPLDSKVQAPKSCSRSAYPYQPSLLAA
Sequences:
>Translated_228_residues MHIRDVELTGKLMLPKHFCWTRFGTEAGEKIDSILARKEQERLATGGMFLWGIGNSVGPAIRDLIRLEERPIVLFSPMRS KPKAIDVTPSGLTVWSEAIDLDGRDWPIPEGVKVTSRQGSETGRIKRSHYALVCRTSSPLRTLDFANLRYEELVNLQSKN KLGASQVTAVVEQRARGTADCTTYPVAFMAELVFPYFVKLGGPLDSKVQAPKSCSRSAYPYQPSLLAA >Mature_228_residues MHIRDVELTGKLMLPKHFCWTRFGTEAGEKIDSILARKEQERLATGGMFLWGIGNSVGPAIRDLIRLEERPIVLFSPMRS KPKAIDVTPSGLTVWSEAIDLDGRDWPIPEGVKVTSRQGSETGRIKRSHYALVCRTSSPLRTLDFANLRYEELVNLQSKN KLGASQVTAVVEQRARGTADCTTYPVAFMAELVFPYFVKLGGPLDSKVQAPKSCSRSAYPYQPSLLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25311; Mature: 25311
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRDVELTGKLMLPKHFCWTRFGTEAGEKIDSILARKEQERLATGGMFLWGIGNSVGPA CCCCCEEECCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHH IRDLIRLEERPIVLFSPMRSKPKAIDVTPSGLTVWSEAIDLDGRDWPIPEGVKVTSRQGS HHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCC ETGRIKRSHYALVCRTSSPLRTLDFANLRYEELVNLQSKNKLGASQVTAVVEQRARGTAD CCCCEEECEEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC CTTYPVAFMAELVFPYFVKLGGPLDSKVQAPKSCSRSAYPYQPSLLAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHCCC >Mature Secondary Structure MHIRDVELTGKLMLPKHFCWTRFGTEAGEKIDSILARKEQERLATGGMFLWGIGNSVGPA CCCCCEEECCEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHH IRDLIRLEERPIVLFSPMRSKPKAIDVTPSGLTVWSEAIDLDGRDWPIPEGVKVTSRQGS HHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCC ETGRIKRSHYALVCRTSSPLRTLDFANLRYEELVNLQSKNKLGASQVTAVVEQRARGTAD CCCCEEECEEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC CTTYPVAFMAELVFPYFVKLGGPLDSKVQAPKSCSRSAYPYQPSLLAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA