| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612369
Identifier: 120612369
GI number: 120612369
Start: 4113820
End: 4114761
Strand: Direct
Name: 120612369
Synonym: Aave_3726
Alternate gene names: NA
Gene position: 4113820-4114761 (Clockwise)
Preceding gene: 120612368
Following gene: 120612370
Centisome position: 76.85
GC content: 70.49
Gene sequence:
>942_bases ATGCAGGCACTCCACCGCGGCGCTGCGCGATCCACTCTTTTTTTCCAGAACGTTCCGACCTCCAACCCCTGCCCTTCCAT GCCACAGGCCAAGCTCGTTTACATACTGTCCCTGCGCAACGCGGCCGCCGACCAGGCCGGCCAGTTCATCGACTACCGCG GCGGGCGGCGCTACATGCCCTCCCCGCTCGAATACCTGGCGCACGCGCTCGACACCACGCCGCTCGGGGAGGCCTACTCC CTGGAAGGCATCGTGTTCGACGACGACCCGCAATCGCCGCGGGACCGCGCGGCGCTGAACGGCTACGGCTTCGCATGCAC GCCGGGCGAGCGCTGGATCTTTCCGCACGAACTCGCCACCCAGGACCGCAAGCTGCGCGACCTGCTGCGGCCCGTGCCGT CGGAGTACCGCCGCCTGCCCCTGGCCGATCCGGGCCGCGCGGCCGGCAAGCAGGCTTTCGAGGCCGCGCTGCAGCGCACG CTGGAATCGCTGGAGGCCGACATCGTGGTGCTCGACGGCCTGCTGGTCATCCTGGATGCGCTGGTGCAGCCCGGCGCGCC GTTCCACCGCCGCATCGTGAACATCCACCCGGGCATCACCCGGCTGGAGTCGCCCTACCGGCGCCGCGGCGCGCACGCCA CGCTGGACGCCCTGCACGGAGCCCGCGGCGAGCGCGTGACCGACTGGCAGCGCATGGCCACGGAGCCGGTCACGCCGATC CTGCGGACCGGTGCGTCGCTGCACTACGTCGATGACGGGATCGACTCGGGCGAGGTCATCTACGACGTGCTGGGCACGCC GATCGACCCGGCCGACACGATCCTGCAGCTGCGCTGGAACAACTTCCACCGCAGCCTGTTCCCCGCGCTCCACCAGGGCC TGCAGCTGCTGGCCCCGCACCTGTCGGGCGCGCCTAGGCCCGCTTCGCCATTCCACCTTTGA
Upstream 100 bases:
>100_bases GCTGGACCCGCGGCACCGCGCACCGCCGGCCGGGCGCAGGCCGGATGCCTGTGCCGATGCACCGGACGCGGCGCAGCCGG CGGGCCCGGGCTGAAGCGGC
Downstream 100 bases:
>100_bases GGACGAACAGGAGACAGACCGTGAAATTCGCCACGCCCCATACCCCGACTTCTTCCCCTTCCTCCGCTGCTGCGGACACC CAGGCCGCCGCCGGCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Siderophore Biosynthesis Related Protein
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MQALHRGAARSTLFFQNVPTSNPCPSMPQAKLVYILSLRNAAADQAGQFIDYRGGRRYMPSPLEYLAHALDTTPLGEAYS LEGIVFDDDPQSPRDRAALNGYGFACTPGERWIFPHELATQDRKLRDLLRPVPSEYRRLPLADPGRAAGKQAFEAALQRT LESLEADIVVLDGLLVILDALVQPGAPFHRRIVNIHPGITRLESPYRRRGAHATLDALHGARGERVTDWQRMATEPVTPI LRTGASLHYVDDGIDSGEVIYDVLGTPIDPADTILQLRWNNFHRSLFPALHQGLQLLAPHLSGAPRPASPFHL
Sequences:
>Translated_313_residues MQALHRGAARSTLFFQNVPTSNPCPSMPQAKLVYILSLRNAAADQAGQFIDYRGGRRYMPSPLEYLAHALDTTPLGEAYS LEGIVFDDDPQSPRDRAALNGYGFACTPGERWIFPHELATQDRKLRDLLRPVPSEYRRLPLADPGRAAGKQAFEAALQRT LESLEADIVVLDGLLVILDALVQPGAPFHRRIVNIHPGITRLESPYRRRGAHATLDALHGARGERVTDWQRMATEPVTPI LRTGASLHYVDDGIDSGEVIYDVLGTPIDPADTILQLRWNNFHRSLFPALHQGLQLLAPHLSGAPRPASPFHL >Mature_313_residues MQALHRGAARSTLFFQNVPTSNPCPSMPQAKLVYILSLRNAAADQAGQFIDYRGGRRYMPSPLEYLAHALDTTPLGEAYS LEGIVFDDDPQSPRDRAALNGYGFACTPGERWIFPHELATQDRKLRDLLRPVPSEYRRLPLADPGRAAGKQAFEAALQRT LESLEADIVVLDGLLVILDALVQPGAPFHRRIVNIHPGITRLESPYRRRGAHATLDALHGARGERVTDWQRMATEPVTPI LRTGASLHYVDDGIDSGEVIYDVLGTPIDPADTILQLRWNNFHRSLFPALHQGLQLLAPHLSGAPRPASPFHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34647; Mature: 34647
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALHRGAARSTLFFQNVPTSNPCPSMPQAKLVYILSLRNAAADQAGQFIDYRGGRRYMP CCHHHHCCHHHEEEEECCCCCCCCCCCCCHHEEEEEEHHHHHHHHHCCEEECCCCCCCCC SPLEYLAHALDTTPLGEAYSLEGIVFDDDPQSPRDRAALNGYGFACTPGERWIFPHELAT CHHHHHHHHHCCCCCCCCEECCEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCHHHHH QDRKLRDLLRPVPSEYRRLPLADPGRAAGKQAFEAALQRTLESLEADIVVLDGLLVILDA HHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LVQPGAPFHRRIVNIHPGITRLESPYRRRGAHATLDALHGARGERVTDWQRMATEPVTPI HHCCCCHHHHHEEECCCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCHH LRTGASLHYVDDGIDSGEVIYDVLGTPIDPADTILQLRWNNFHRSLFPALHQGLQLLAPH HHCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHH LSGAPRPASPFHL HCCCCCCCCCCCC >Mature Secondary Structure MQALHRGAARSTLFFQNVPTSNPCPSMPQAKLVYILSLRNAAADQAGQFIDYRGGRRYMP CCHHHHCCHHHEEEEECCCCCCCCCCCCCHHEEEEEEHHHHHHHHHCCEEECCCCCCCCC SPLEYLAHALDTTPLGEAYSLEGIVFDDDPQSPRDRAALNGYGFACTPGERWIFPHELAT CHHHHHHHHHCCCCCCCCEECCEEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCHHHHH QDRKLRDLLRPVPSEYRRLPLADPGRAAGKQAFEAALQRTLESLEADIVVLDGLLVILDA HHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LVQPGAPFHRRIVNIHPGITRLESPYRRRGAHATLDALHGARGERVTDWQRMATEPVTPI HHCCCCHHHHHEEECCCCHHHHCCHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCHH LRTGASLHYVDDGIDSGEVIYDVLGTPIDPADTILQLRWNNFHRSLFPALHQGLQLLAPH HHCCCCEEEECCCCCCCHHHHHHHCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHH LSGAPRPASPFHL HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA