| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612364
Identifier: 120612364
GI number: 120612364
Start: 4108419
End: 4108673
Strand: Reverse
Name: 120612364
Synonym: Aave_3721
Alternate gene names: NA
Gene position: 4108673-4108419 (Counterclockwise)
Preceding gene: 120612365
Following gene: 120612363
Centisome position: 76.76
GC content: 70.98
Gene sequence:
>255_bases ATGCCCGCCACGAATTCCCGCACCCCCTGGCCCTTCCCGACGGCCGACGCCCATCCCTCTCCCGCGCCCGCCGCTGGCAC TGGCACTGGCACGGACAGCACGGCCTGCGGGCTGCAGGTGCAGGCCGTCGAGGAAGACACGCTCGACAGCGCCGTGGAAG AGACCTTCCCCGCCAGCGATCCCGTGTCTGTCGTCAGCACCAAGTCCGTTTCCGCCGACGAGGGGGCGGCGGACGACCCC AAGGCCAAGCGTTGA
Upstream 100 bases:
>100_bases TTGCCGCGTCCCCTGGCAGGAGCCTCCCGCTCCGGGCCGGCCCTGCCTGCCATGCCGGGGGAGGGAAGGCGCATCGGCAA ATTTGCAGCAAGGAGCGACC
Downstream 100 bases:
>100_bases CGACAACGACAGCGCCGATGCCCACGCCGACGCTGACGCTGGCCCCGGCAGTCGCCGGACGGCCCGGCCCGGCCACCCGG ATCCGATGAACCCGCCACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MPATNSRTPWPFPTADAHPSPAPAAGTGTGTDSTACGLQVQAVEEDTLDSAVEETFPASDPVSVVSTKSVSADEGAADDP KAKR
Sequences:
>Translated_84_residues MPATNSRTPWPFPTADAHPSPAPAAGTGTGTDSTACGLQVQAVEEDTLDSAVEETFPASDPVSVVSTKSVSADEGAADDP KAKR >Mature_83_residues PATNSRTPWPFPTADAHPSPAPAAGTGTGTDSTACGLQVQAVEEDTLDSAVEETFPASDPVSVVSTKSVSADEGAADDPK AKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8470; Mature: 8339
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATNSRTPWPFPTADAHPSPAPAAGTGTGTDSTACGLQVQAVEEDTLDSAVEETFPASD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC PVSVVSTKSVSADEGAADDPKAKR CCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PATNSRTPWPFPTADAHPSPAPAAGTGTGTDSTACGLQVQAVEEDTLDSAVEETFPASD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCC PVSVVSTKSVSADEGAADDPKAKR CCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA