Click here to switch to the map view.

The map label for this gene is petA [H]

Identifier: 120612340

GI number: 120612340

Start: 4073437

End: 4074036

Strand: Reverse

Name: petA [H]

Synonym: Aave_3696

Alternate gene names: 120612340

Gene position: 4074036-4073437 (Counterclockwise)

Preceding gene: 120612342

Following gene: 120612339

Centisome position: 76.11

GC content: 67.5

Gene sequence:

>600_bases
ATGAGTGAAACCCCAATCGACTCCAGCAAGCGGACGTGGCTCATAGCGTCGGGCTGTGCTGGTGCGGTGGGCGGCGTGGC
GACGGCCGTGCCGTTCGTGAGCACTTTCCAGCCTTCCGAGAAAGCCAAGGCCGCAGGGGCCGCCGTGGAGGTGGACATCG
CCGGCCTGAAGGCCGGCGAGAAGATCACTGTCGAGTGGCGCGGCAAACCGGTCTGGATCATCAAGCGCACGCCCGAACAG
CTCGCGGCGCTGCCGGGGCTCGACCCCCAGCTCGCCGATCCCAGGTCCGAGCGCAAGCCCTCGGAGCTCACCCCCGAATA
CGCGCGCAACGAGAACCGCTCCATCAAGCCCGAGATCCTCGTGGCCGTGGGCATCTGCACGCACCTCGGCTGCTCGCCGA
GCGACAAGTTCACCCCGGGCGCGCAGCCCTCGCTGCCCGACGACTGGAAGGGCGGCTTCCTCTGCCCCTGCCACGGCTCC
ACGTTCGACATGGCCGGCCGCGTGTTCAAGAACAAGCCCGCGCCCGACAACCTCGAGGTGCCTCCCCACATGTACCTGTC
GGAGACCAGGCTCCTGATCGGTGAAGACAAGAAGGCCTGA

Upstream 100 bases:

>100_bases
GTATTGCCGAGCCGCGGGGGTGATAACCCCTGGAATTAACCTTACTTGCGCCGCTACAATTTGTGATTGCTCCCCCAGCG
ACGACCTATTGAGGACCCCC

Downstream 100 bases:

>100_bases
GGGAGACGCACATGGCTTACCGCGAATTCAAGGACATCTCCCCCAACGCCTCCACGGGCGCCAAGGTCACGAACTGGCTC
GAGAACCGCTTCCCCACGGC

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKAAGAAVEVDIAGLKAGEKITVEWRGKPVWIIKRTPEQ
LAALPGLDPQLADPRSERKPSELTPEYARNENRSIKPEILVAVGICTHLGCSPSDKFTPGAQPSLPDDWKGGFLCPCHGS
TFDMAGRVFKNKPAPDNLEVPPHMYLSETRLLIGEDKKA

Sequences:

>Translated_199_residues
MSETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKAAGAAVEVDIAGLKAGEKITVEWRGKPVWIIKRTPEQ
LAALPGLDPQLADPRSERKPSELTPEYARNENRSIKPEILVAVGICTHLGCSPSDKFTPGAQPSLPDDWKGGFLCPCHGS
TFDMAGRVFKNKPAPDNLEVPPHMYLSETRLLIGEDKKA
>Mature_198_residues
SETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKAAGAAVEVDIAGLKAGEKITVEWRGKPVWIIKRTPEQL
AALPGLDPQLADPRSERKPSELTPEYARNENRSIKPEILVAVGICTHLGCSPSDKFTPGAQPSLPDDWKGGFLCPCHGST
FDMAGRVFKNKPAPDNLEVPPHMYLSETRLLIGEDKKA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=184, Percent_Identity=31.5217391304348, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17540418, Length=165, Percent_Identity=37.5757575757576, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320811, Length=171, Percent_Identity=34.5029239766082, Blast_Score=99, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24580896, Length=167, Percent_Identity=37.7245508982036, Blast_Score=105, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21304; Mature: 21172

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKAAGAAVEVDIAGLKAGE
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCCCC
KITVEWRGKPVWIIKRTPEQLAALPGLDPQLADPRSERKPSELTPEYARNENRSIKPEIL
EEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEE
VAVGICTHLGCSPSDKFTPGAQPSLPDDWKGGFLCPCHGSTFDMAGRVFKNKPAPDNLEV
EEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCC
PPHMYLSETRLLIGEDKKA
CCCEEECCEEEEEECCCCC
>Mature Secondary Structure 
SETPIDSSKRTWLIASGCAGAVGGVATAVPFVSTFQPSEKAKAAGAAVEVDIAGLKAGE
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEECCCCCC
KITVEWRGKPVWIIKRTPEQLAALPGLDPQLADPRSERKPSELTPEYARNENRSIKPEIL
EEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEE
VAVGICTHLGCSPSDKFTPGAQPSLPDDWKGGFLCPCHGSTFDMAGRVFKNKPAPDNLEV
EEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCC
PPHMYLSETRLLIGEDKKA
CCCEEECCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA