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The map label for this gene is 120612313

Identifier: 120612313

GI number: 120612313

Start: 4046033

End: 4046713

Strand: Reverse

Name: 120612313

Synonym: Aave_3669

Alternate gene names: NA

Gene position: 4046713-4046033 (Counterclockwise)

Preceding gene: 120612314

Following gene: 120612306

Centisome position: 75.6

GC content: 70.63

Gene sequence:

>681_bases
ATGAACTGGGGTGGTGGGGTGAGGGGCGGGACGCCCGGCAGGGGCCTGTCCCGGCGTGCGTGCGTGCTGGCCGGCGCGTC
TTCAGGATTGGCCGGGTGGCTCGGCGTGCCTGCGACCGCCCATGCGGGCGGGCAGCTGGAAGAGCCGCTGGCGGATTCGG
TGCGCACCGCGCTCACGTCCGCGATCGCCAACCAGGCGCCGCCCGAGCCGAACTTCTCGACCACGGAAGCCCGCCTGCAC
TACCTGCGCTGGCTCGGCACCATGAGCGACCGCCTGCGGCGCCGCAAGCCGGACTGGGAAGTGCGCCGCGACTTCCTGCA
GACCGTGTGGTACGAATCCAAGCGCGCGGGCCTCGACGTTTCGCTCGTGCTCGGTCTGGTGCAGGTGGAGAGTGCGTTCC
GCAAGTACGCCGTCTCCAGCGTGGGCGCGCGCGGCTACATGCAGGTGATGCCGTTCTGGACGCGCGTCATCGGCGACGGC
GATGCGAGCAAGCTGTTCCACATGCAGACCAACCTGCGCTTCGGCTGCGTGATCCTGCGCCACTACCTGGACCGCGAGCG
CGGCGACCTGTTCATGACGCTCGGGCGCTACAACGGCAGCCGCGGGCGTTCGCCGTACCCGGACGCGGTGTTCGCGGCGC
AGCGCAACTGGCTGTTCGAGGACCGCGTCCGGTCCGCCTGA

Upstream 100 bases:

>100_bases
TCAAGGAGGGCCAGGTCGAGTACCAGCACCGCCGGGATGCGGCGGCGACCAAGGTGGCGTCGGCCGATATCTTTGCCTTC
ATCAAGGATCGAATCAAGGT

Downstream 100 bases:

>100_bases
GCAGGCCGATGCGCCGCGTTCAGCCGCCCGGGGCCGGTGCCGGCCCGGGCCCGGCGGGATGGGCGCCGCCTTCCTGCAGG
CGCGACACCATGATCTGGTC

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: Transglycosylase SLT Domain Protein; Transglycosylase; Lytic Murein Transglycosylase; Twin-Arginine Translocation Pathway Signal; Soluble Lytic Murein Transglycosylase-Like; Lytic Transglycosylase; SLT Domain-Containing Protein; Signal Peptide Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNWGGGVRGGTPGRGLSRRACVLAGASSGLAGWLGVPATAHAGGQLEEPLADSVRTALTSAIANQAPPEPNFSTTEARLH
YLRWLGTMSDRLRRRKPDWEVRRDFLQTVWYESKRAGLDVSLVLGLVQVESAFRKYAVSSVGARGYMQVMPFWTRVIGDG
DASKLFHMQTNLRFGCVILRHYLDRERGDLFMTLGRYNGSRGRSPYPDAVFAAQRNWLFEDRVRSA

Sequences:

>Translated_226_residues
MNWGGGVRGGTPGRGLSRRACVLAGASSGLAGWLGVPATAHAGGQLEEPLADSVRTALTSAIANQAPPEPNFSTTEARLH
YLRWLGTMSDRLRRRKPDWEVRRDFLQTVWYESKRAGLDVSLVLGLVQVESAFRKYAVSSVGARGYMQVMPFWTRVIGDG
DASKLFHMQTNLRFGCVILRHYLDRERGDLFMTLGRYNGSRGRSPYPDAVFAAQRNWLFEDRVRSA
>Mature_226_residues
MNWGGGVRGGTPGRGLSRRACVLAGASSGLAGWLGVPATAHAGGQLEEPLADSVRTALTSAIANQAPPEPNFSTTEARLH
YLRWLGTMSDRLRRRKPDWEVRRDFLQTVWYESKRAGLDVSLVLGLVQVESAFRKYAVSSVGARGYMQVMPFWTRVIGDG
DASKLFHMQTNLRFGCVILRHYLDRERGDLFMTLGRYNGSRGRSPYPDAVFAAQRNWLFEDRVRSA

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25164; Mature: 25164

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWGGGVRGGTPGRGLSRRACVLAGASSGLAGWLGVPATAHAGGQLEEPLADSVRTALTS
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
AIANQAPPEPNFSTTEARLHYLRWLGTMSDRLRRRKPDWEVRRDFLQTVWYESKRAGLDV
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
SLVLGLVQVESAFRKYAVSSVGARGYMQVMPFWTRVIGDGDASKLFHMQTNLRFGCVILR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHH
HYLDRERGDLFMTLGRYNGSRGRSPYPDAVFAAQRNWLFEDRVRSA
HHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MNWGGGVRGGTPGRGLSRRACVLAGASSGLAGWLGVPATAHAGGQLEEPLADSVRTALTS
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
AIANQAPPEPNFSTTEARLHYLRWLGTMSDRLRRRKPDWEVRRDFLQTVWYESKRAGLDV
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
SLVLGLVQVESAFRKYAVSSVGARGYMQVMPFWTRVIGDGDASKLFHMQTNLRFGCVILR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEEEHHCCCHHHHHHHH
HYLDRERGDLFMTLGRYNGSRGRSPYPDAVFAAQRNWLFEDRVRSA
HHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA