| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612302
Identifier: 120612302
GI number: 120612302
Start: 4034516
End: 4035484
Strand: Reverse
Name: 120612302
Synonym: Aave_3657
Alternate gene names: NA
Gene position: 4035484-4034516 (Counterclockwise)
Preceding gene: 120612304
Following gene: 120612294
Centisome position: 75.39
GC content: 68.94
Gene sequence:
>969_bases ATGCGCTTGCGCACTTGGCTCACCGCTGTCGCCCTGGCCTGCACGTCCGTGGCTGTGCCGGCCCAGCCCGCTTTCCCCTC CAAACCCATCCGCGTGGTGGTCGGCTTCCCGGCCGGAGGCCCGCTGGACCAGCATGCGCGGCTGCTGACCGACAAGCTGC AGGCCGTGCTGGGCCAGCCCGTGGTGGTGGACTACAAGGCCGGGGCGGGCGGCACGGTGGGCGCGCAGGATGTGATGAAG GCGCCGCCCGACGGCCATACGCTGATGCTGGCCAACACGGGCGTGATGGTCATCAACCCGGCGCTCTACGGCAAGCTGCC TTACTCCACGCTCAGGGATTTCACGCCCATCGCGCGCACGGCGATGCAGCCGCTGGCGCTGCTGGTCAATCCGAAGCTGC CGGCGCAGAACCTGCAGGAGTTCATCGCGTACGCGAAGGCGCGGCCGGGGCAGGTCAATTTCGGCTCGGCGGGCAACGGG GGCATCAGCCACCTGGTGCCGGAAATGTTCAAGACGGCCACGGGGCTGTTCATGGTGCACATCCTGTACCGCGGCAGCGC GCCGGCCTTCACCGACCTGATGGGTGGGCAGGTGCAGTTCATGGCCGAGAGCATTCCGCAGGCGGCGGCGTACCACAAGC AGGGCAAGGTGCGCGCGCTGGCCGTCACCAGCCGCGAGCGCAACCCGGCGCTGCCCGATGTGCCGACGGCGATCGAGAGC GGGCTGAAGAACTTCGAGGTGGTGGGTTTCTACGGCTTTCTGGCACCGGCCGGCACGCCCAAGGATGTGGTGGCGAAGCT CAGCGATGCGTTCGGCCAGGTCATGCAGTCGCCCGACGTGAAAAACCGCATGGTGGCGCAGGGCGCCGATCCGGCCTTCC TGGGCGCCGATGCGTTCGCCAGTTTCCTCGCGGCGGAGATGCCGCGCTGGGCCGTGGCGGTGCAGCAGTCCGGCGCCAAG CTGGACTGA
Upstream 100 bases:
>100_bases GTGCCTTCTCCAGGCGGCCCCGCGGGTATTGCCCCGTGCCGTCCCCCGTCGCTCCCCCCTAAGCTCCCGTCTCCACAACA CCCACATTCGGAGATCCCCC
Downstream 100 bases:
>100_bases ACTGGGTTGAACCGGAGCCGCCGGCGGGCGTGCGGCGGTGGCTTACGCCGTGCCCGGCGTCGGCGTGCCGGCCGGCTCCC TGGGCGGGAGGGCGGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRLRTWLTAVALACTSVAVPAQPAFPSKPIRVVVGFPAGGPLDQHARLLTDKLQAVLGQPVVVDYKAGAGGTVGAQDVMK APPDGHTLMLANTGVMVINPALYGKLPYSTLRDFTPIARTAMQPLALLVNPKLPAQNLQEFIAYAKARPGQVNFGSAGNG GISHLVPEMFKTATGLFMVHILYRGSAPAFTDLMGGQVQFMAESIPQAAAYHKQGKVRALAVTSRERNPALPDVPTAIES GLKNFEVVGFYGFLAPAGTPKDVVAKLSDAFGQVMQSPDVKNRMVAQGADPAFLGADAFASFLAAEMPRWAVAVQQSGAK LD
Sequences:
>Translated_322_residues MRLRTWLTAVALACTSVAVPAQPAFPSKPIRVVVGFPAGGPLDQHARLLTDKLQAVLGQPVVVDYKAGAGGTVGAQDVMK APPDGHTLMLANTGVMVINPALYGKLPYSTLRDFTPIARTAMQPLALLVNPKLPAQNLQEFIAYAKARPGQVNFGSAGNG GISHLVPEMFKTATGLFMVHILYRGSAPAFTDLMGGQVQFMAESIPQAAAYHKQGKVRALAVTSRERNPALPDVPTAIES GLKNFEVVGFYGFLAPAGTPKDVVAKLSDAFGQVMQSPDVKNRMVAQGADPAFLGADAFASFLAAEMPRWAVAVQQSGAK LD >Mature_322_residues MRLRTWLTAVALACTSVAVPAQPAFPSKPIRVVVGFPAGGPLDQHARLLTDKLQAVLGQPVVVDYKAGAGGTVGAQDVMK APPDGHTLMLANTGVMVINPALYGKLPYSTLRDFTPIARTAMQPLALLVNPKLPAQNLQEFIAYAKARPGQVNFGSAGNG GISHLVPEMFKTATGLFMVHILYRGSAPAFTDLMGGQVQFMAESIPQAAAYHKQGKVRALAVTSRERNPALPDVPTAIES GLKNFEVVGFYGFLAPAGTPKDVVAKLSDAFGQVMQSPDVKNRMVAQGADPAFLGADAFASFLAAEMPRWAVAVQQSGAK LD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33935; Mature: 33935
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRTWLTAVALACTSVAVPAQPAFPSKPIRVVVGFPAGGPLDQHARLLTDKLQAVLGQP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC VVVDYKAGAGGTVGAQDVMKAPPDGHTLMLANTGVMVINPALYGKLPYSTLRDFTPIART EEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCEEEECHHHHCCCCHHHHHHHHHHHHH AMQPLALLVNPKLPAQNLQEFIAYAKARPGQVNFGSAGNGGISHLVPEMFKTATGLFMVH HHHHHHEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH ILYRGSAPAFTDLMGGQVQFMAESIPQAAAYHKQGKVRALAVTSRERNPALPDVPTAIES HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHH GLKNFEVVGFYGFLAPAGTPKDVVAKLSDAFGQVMQSPDVKNRMVAQGADPAFLGADAFA CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEECHHHHH SFLAAEMPRWAVAVQQSGAKLD HHHHHHCCHHEEHHHCCCCCCC >Mature Secondary Structure MRLRTWLTAVALACTSVAVPAQPAFPSKPIRVVVGFPAGGPLDQHARLLTDKLQAVLGQP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC VVVDYKAGAGGTVGAQDVMKAPPDGHTLMLANTGVMVINPALYGKLPYSTLRDFTPIART EEEEEECCCCCCCCHHHHHCCCCCCCEEEEECCCEEEECHHHHCCCCHHHHHHHHHHHHH AMQPLALLVNPKLPAQNLQEFIAYAKARPGQVNFGSAGNGGISHLVPEMFKTATGLFMVH HHHHHHEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH ILYRGSAPAFTDLMGGQVQFMAESIPQAAAYHKQGKVRALAVTSRERNPALPDVPTAIES HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHH GLKNFEVVGFYGFLAPAGTPKDVVAKLSDAFGQVMQSPDVKNRMVAQGADPAFLGADAFA CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEECHHHHH SFLAAEMPRWAVAVQQSGAKLD HHHHHHCCHHEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]