Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612242
Identifier: 120612242
GI number: 120612242
Start: 3965606
End: 3966511
Strand: Reverse
Name: 120612242
Synonym: Aave_3595
Alternate gene names: NA
Gene position: 3966511-3965606 (Counterclockwise)
Preceding gene: 120612243
Following gene: 120612241
Centisome position: 74.1
GC content: 60.26
Gene sequence:
>906_bases ATGAAGGGCACCATGGTGCCGGATGCTTGGGACTGCTACACCAAAACCGTGAACGGCCACCGCGAAACTAGTTTCCGTAA CGTGGTCCTGTGGGAAGAGTCGGATGAACTGCCGCCATCAACGTGGGATGACTACCTGTCTCAGTTTGAGGGTGCCGAAC TGGCCCAGCGAATCGCTGAACGGGAGGCCGAACTGCAGGAGGCGCGCGAGAAACGGCAGGAGTCAAACGCCCAGCGTGCA AAGGCAGCATGCCGCTGGTTCATCAAGGCGAACGGCCTGAATGAGTTGCTCACGATCACCTACCGCGAGAACCAAGAGGA CCGTGCTCTTTGCAAGCTGCATTTCAAAGAGTGGGTCCGGCGCATGAAGCGTGCCCTTGGCGGCCAGTTTGTTTACTGCG CCAGTTTCGAGCGCCAGGAGCGCGGCGCGATGCATGTCCACGTGGCCTGCCACAAGCTGCCCAAGCACGTGCAGCACAAG GGCGCCAAGATTCCCGCTTGGCGGCTCGGTACTGAGATCTGGCGGGCCATCGTCGGTAAAGACAACGGGCTAGTGTTCGT TGGCGGTCGCAACCGATCTGGCAATCGCTACACGAAGCCGCGCAGCATCGCGAAGATCGCTGCGTACGTGTCGAAGTACA TCATGAAGGACTACCGGGACGCGCCGGCCGAGTCCAACCGGTACAGCCGCAGTAACAAGGCGGATGGGGTGCAGGACCTG CCAAAGGCGGAAAAAGCGCGCATCTGGGGTGCCACGTTTGAACAAATGGTCGAACTTGCATTTCGGCTTGAGGATGGCGA CGTGGTGGTGTCGCATCGCCTCACTCGCGACGATTGGCGCGGGGACCGCTATTGGCTCGTTACTGAGCCTGTGAGTCCTG GGGGTAGCCATGGCATCGTCCACTGA
Upstream 100 bases:
>100_bases CCCCCGCATGGACTGCCATCCATCGGGGGCGAGACAGCAACGTATAGGGGGTGATGCTGTGGAGCGCATTGTAAATCTGC CCGGTGGAGGGCGTGTAGTC
Downstream 100 bases:
>100_bases CCAGCGGCAGATCGTTACCGGAAACAGTGCTAGCAGAGTTGCTGCCCATAGAGAACGTCATGAGCGCCTGGATGTGTCCG TAACTTTGCATATGGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKGTMVPDAWDCYTKTVNGHRETSFRNVVLWEESDELPPSTWDDYLSQFEGAELAQRIAEREAELQEAREKRQESNAQRA KAACRWFIKANGLNELLTITYRENQEDRALCKLHFKEWVRRMKRALGGQFVYCASFERQERGAMHVHVACHKLPKHVQHK GAKIPAWRLGTEIWRAIVGKDNGLVFVGGRNRSGNRYTKPRSIAKIAAYVSKYIMKDYRDAPAESNRYSRSNKADGVQDL PKAEKARIWGATFEQMVELAFRLEDGDVVVSHRLTRDDWRGDRYWLVTEPVSPGGSHGIVH
Sequences:
>Translated_301_residues MKGTMVPDAWDCYTKTVNGHRETSFRNVVLWEESDELPPSTWDDYLSQFEGAELAQRIAEREAELQEAREKRQESNAQRA KAACRWFIKANGLNELLTITYRENQEDRALCKLHFKEWVRRMKRALGGQFVYCASFERQERGAMHVHVACHKLPKHVQHK GAKIPAWRLGTEIWRAIVGKDNGLVFVGGRNRSGNRYTKPRSIAKIAAYVSKYIMKDYRDAPAESNRYSRSNKADGVQDL PKAEKARIWGATFEQMVELAFRLEDGDVVVSHRLTRDDWRGDRYWLVTEPVSPGGSHGIVH >Mature_301_residues MKGTMVPDAWDCYTKTVNGHRETSFRNVVLWEESDELPPSTWDDYLSQFEGAELAQRIAEREAELQEAREKRQESNAQRA KAACRWFIKANGLNELLTITYRENQEDRALCKLHFKEWVRRMKRALGGQFVYCASFERQERGAMHVHVACHKLPKHVQHK GAKIPAWRLGTEIWRAIVGKDNGLVFVGGRNRSGNRYTKPRSIAKIAAYVSKYIMKDYRDAPAESNRYSRSNKADGVQDL PKAEKARIWGATFEQMVELAFRLEDGDVVVSHRLTRDDWRGDRYWLVTEPVSPGGSHGIVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34721; Mature: 34721
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTMVPDAWDCYTKTVNGHRETSFRNVVLWEESDELPPSTWDDYLSQFEGAELAQRIAE CCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHH REAELQEAREKRQESNAQRAKAACRWFIKANGLNELLTITYRENQEDRALCKLHFKEWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH RMKRALGGQFVYCASFERQERGAMHVHVACHKLPKHVQHKGAKIPAWRLGTEIWRAIVGK HHHHHHCCCEEEEECCCHHHCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC DNGLVFVGGRNRSGNRYTKPRSIAKIAAYVSKYIMKDYRDAPAESNRYSRSNKADGVQDL CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC PKAEKARIWGATFEQMVELAFRLEDGDVVVSHRLTRDDWRGDRYWLVTEPVSPGGSHGIV CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC H C >Mature Secondary Structure MKGTMVPDAWDCYTKTVNGHRETSFRNVVLWEESDELPPSTWDDYLSQFEGAELAQRIAE CCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHH REAELQEAREKRQESNAQRAKAACRWFIKANGLNELLTITYRENQEDRALCKLHFKEWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH RMKRALGGQFVYCASFERQERGAMHVHVACHKLPKHVQHKGAKIPAWRLGTEIWRAIVGK HHHHHHCCCEEEEECCCHHHCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC DNGLVFVGGRNRSGNRYTKPRSIAKIAAYVSKYIMKDYRDAPAESNRYSRSNKADGVQDL CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC PKAEKARIWGATFEQMVELAFRLEDGDVVVSHRLTRDDWRGDRYWLVTEPVSPGGSHGIV CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA