Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612214
Identifier: 120612214
GI number: 120612214
Start: 3939529
End: 3940176
Strand: Direct
Name: 120612214
Synonym: Aave_3567
Alternate gene names: NA
Gene position: 3939529-3940176 (Clockwise)
Preceding gene: 120612213
Following gene: 120612215
Centisome position: 73.6
GC content: 71.76
Gene sequence:
>648_bases GTGAACGGGCCCGCGCGCTCCCGGCGCCTGCGGGCTGTCGCGCTGGCATCGGCGCTGGGGCCCGGGCTGCTGCTGGCAGC GGCCACGGCGGGCGCCCATGCGCAGGGCGCGACGGAGCAGCAATGGAGCTTCGCCGTGTCGCTGGACGGCAGCCCGATCG GCGAGCACCGATTCCGGCTCGGCGCCCTGGAGGGCGGCAGCCGCCAGTTGGAAAGCTCGGCACGCTTCACGGTGAAAGTG CTGGGCATCGCGGTGTACCGGTACCGGCACGAAGCCCGGGAGCAGTGGCGTGGCAACTGCCTGAGGCGCATCGCGACCGA CACCGACGACGACGGCGACCGCAGCACGGTGCGCCAGGAATTCCCGCCGGACGGCCCCTGCACGCGCAGCTTCGCCTATT GGAATCCGGCCATCCTGGAATCCCGGCAACTGCTGGACCCGCAGACCGGGAAGCTCGAGCCGGTGCAGATATCCCGCGAG GAAGACGGCTCCATCACCGTGCGCGGCCAGCCCCGCGCGGCAACGCGCTGGCGCATCACCGGGCCCCGCAACCCCATCGA CGTCTGGTACGCAGCCGACACCGGAGAGTGGGTGGGGCTGGATTCCACCGTGCGTGGCGGGCGCAAGCTCAGCTACCGGC TTCCATGA
Upstream 100 bases:
>100_bases TGCTCGAAAAGGACATGCCCTCGCGCAGGCCGGCCTATCGCGAATACCAGCGCCGCACGAGCGCCTTCATCCCGATGCCG CCGCGGCCCGGGAGGCCCTC
Downstream 100 bases:
>100_bases CGGCATCCGCACTCCCGCAGCCCCACCCCGTTCCCTTCCACCTCCATCTTCCGAAAGCCGACATGCCACGCACCTACGCC ATCGCCTACGCCGCCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNGPARSRRLRAVALASALGPGLLLAAATAGAHAQGATEQQWSFAVSLDGSPIGEHRFRLGALEGGSRQLESSARFTVKV LGIAVYRYRHEAREQWRGNCLRRIATDTDDDGDRSTVRQEFPPDGPCTRSFAYWNPAILESRQLLDPQTGKLEPVQISRE EDGSITVRGQPRAATRWRITGPRNPIDVWYAADTGEWVGLDSTVRGGRKLSYRLP
Sequences:
>Translated_215_residues MNGPARSRRLRAVALASALGPGLLLAAATAGAHAQGATEQQWSFAVSLDGSPIGEHRFRLGALEGGSRQLESSARFTVKV LGIAVYRYRHEAREQWRGNCLRRIATDTDDDGDRSTVRQEFPPDGPCTRSFAYWNPAILESRQLLDPQTGKLEPVQISRE EDGSITVRGQPRAATRWRITGPRNPIDVWYAADTGEWVGLDSTVRGGRKLSYRLP >Mature_215_residues MNGPARSRRLRAVALASALGPGLLLAAATAGAHAQGATEQQWSFAVSLDGSPIGEHRFRLGALEGGSRQLESSARFTVKV LGIAVYRYRHEAREQWRGNCLRRIATDTDDDGDRSTVRQEFPPDGPCTRSFAYWNPAILESRQLLDPQTGKLEPVQISRE EDGSITVRGQPRAATRWRITGPRNPIDVWYAADTGEWVGLDSTVRGGRKLSYRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23696; Mature: 23696
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPARSRRLRAVALASALGPGLLLAAATAGAHAQGATEQQWSFAVSLDGSPIGEHRFRL CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE GALEGGSRQLESSARFTVKVLGIAVYRYRHEAREQWRGNCLRRIATDTDDDGDRSTVRQE EECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC FPPDGPCTRSFAYWNPAILESRQLLDPQTGKLEPVQISREEDGSITVRGQPRAATRWRIT CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEC GPRNPIDVWYAADTGEWVGLDSTVRGGRKLSYRLP CCCCCEEEEEECCCCCEECCCHHHCCCCEEEEECC >Mature Secondary Structure MNGPARSRRLRAVALASALGPGLLLAAATAGAHAQGATEQQWSFAVSLDGSPIGEHRFRL CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE GALEGGSRQLESSARFTVKVLGIAVYRYRHEAREQWRGNCLRRIATDTDDDGDRSTVRQE EECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC FPPDGPCTRSFAYWNPAILESRQLLDPQTGKLEPVQISREEDGSITVRGQPRAATRWRIT CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEC GPRNPIDVWYAADTGEWVGLDSTVRGGRKLSYRLP CCCCCEEEEEECCCCCEECCCHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA