Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612185
Identifier: 120612185
GI number: 120612185
Start: 3907665
End: 3910217
Strand: Reverse
Name: 120612185
Synonym: Aave_3535
Alternate gene names: NA
Gene position: 3910217-3907665 (Counterclockwise)
Preceding gene: 120612186
Following gene: 120612176
Centisome position: 73.05
GC content: 55.7
Gene sequence:
>2553_bases ATGCCAGGGACTAATGATTTCGATATAAGAAACCGCCCTCATATCCCGATTGAACGCTTTCGCGAGTCAAGCACGTATAC ATACCCTTCACGAAACCAAAAACGAAAGCCTCTGAGAGGAGACTATGCTGCTCACGCGGCTAAATTGCTGGAACAGTTGA GCTCTGCACTTGGTGACCTACCGCCAAGAAGTACAGATGCACGCAGAATTGTTCCGGGGCTCAAGCTTGGAACCGTTGTC GAAGTCACAACGATCGCGCCCTCTGGTCCCCGTGCACAAGCAGCCAAAATTCCTGCGTCGCTCGATTTCCCTGTTCAGGA TGTCGTAGTACTTCGGGCGGAACGCAACAGCGACCGAACCGAATCTGCCCTCTTGTTTGTTCCGGATGATGCGCGAGCCT TCCTGAAAGACCGCATTACCGAATATGGGAGAGCTCCGGATCCAGACCATCGTCCCGACATCAACCGCTTTGAAATCCTA GAGCAGGTTGATGCCGCAGGCCCCGAGGCTTTGTTTACCGGTTCGGTGGACCTAAACGATCCCGCTATAGTGTGGTGGGA GCTTTGGGTTCGTCAACCGACTGTGCAGATCGATCAGATCGTGGCTGCGGCTCGCACGGCGCAGATTGACGTGCATGAGG ATCGTCTGCTATTTCCTGATACGGCAGTTCTGTTCCTGCATGCGGCAGCCGCCACAATTGCCGCATTTGCCACGAGCTTG CCAGGTGCTATTACCGATATTCGCCAGGCGACGGGAACCATTGAGACCTTTCTGACACAAGGGCGGTCGGCCATCGGGCC GCAGCAATGGATGCATGACTTGGCGGATCGGGTAGTTCCAGCGACTGATGGTGCTCCCGTGGTATGCCTGCTCGACACCG GAGTCTCCGCGCGGCATCCGCTCATTGCCCCTGCGCTTCGCGGCGCTTGGTCATACGATGAGGCTTGGGGCGTGGATGAC CATGGCCTTCACGGCGGCCATGGGACTCCGCTTGCTGGCTTGGTACTTTACGGGGATCTCGAGCCACTCATGAACGACTC GCGCTACGTGTTTCTTACGCATGATGCAGAGTCGATGAAGTTACTGCCGCCGCGTGGATTTCCACCCACGAAGCCTCCCA GCTATGGGGTGGTAACGCAGGGAGCGGTCAGTGCGGTGGAGATCGAGCGCCCCGGAGCCAAACGGATATTTTGTATCGCA TGTTCGACAGAAGACTTGCCGCCCGACCGTCCGTCGACTTGGAGTGGTGCGCTTGACCAAATCGCTTCTGGCTCGATGCC TGGTGAGGCTAGTGCTGTGCCTACAGCTCTGGAGCGGCCTAAGCGACTGCTGGTCGTTGCCACCGGCAATGTACAAAACG GCATGATCCCGGACGTGCTCACATCGCAACCACTTGAAGATCCTGCGCAGAGCTGGAACGCTTTGACTATTGGTGGGTTC ACCCGCAAAGATTTACCTCCCCGCACTCCTACAGGACTTAAGCCAGCGGTGCCTGCCAATCATCGAAGTCCTTTCAGTCG CGGCTCGCAGTCCTTGCCCAGCGATTTAACACCAATCAAGCCCGAAGTGCTGTTTGAAGCCGGCAACATGCTTGCCGATG CGTCCGGCTTCTGTGAGTGGGGTCCTTCAGTGTCTTTGCTGTCGACCGGCTCAAACGTTGCGCATGAGCCATTGGTGCCA ATGTGGGCTACCAGCGCGGCAACGGGCATGGCGGGGCATTTCTTAGGTCGTCTGCAGGCAGCGTTGCCTAGCTTCTGGCC GGAAACACTTCGCGCACTTGTTGTTGATTCCGCCCGATGGACAGAGCCCATGCGAAAGAAACTAATCGGTACCGGAGCAC ATTGGAAGACCGGTACAAAAAAGCAGTTTCAAGCACAGCTTCGGGAGGTCGGCTACGGGGTTCCAGATCTGGAGCGGGCT ACCTTGTCCGCTGCCAACGATGCCACCTTAATTGCACAATCGGAAATCCAGCCTTATGCGTTGGGATCCGATGGAAAAAC AGGTGTCTTTAATCAAGTTCATTTCTATGACTTGCCATGGCCTAAAAGCGCGCTAGAACAACTAGAGAATGAAGTGGTTT CGATGAAGGTCACGCTGTCGTACTTCATCGAGCCGAATCTGACCGGTAAGGCGGCGACTAGACCTGAGACCTACCGTTCT TTCGGTTTGCGCTTTGAGATGAAGAAGCGAGGCGAGACGAATGCCCGGTTTAAGCATCGCATCTCGTCAAGCCAACAAAA GGATGGCTCAGAAAGCGAGCAGGAGGCTAGTTATTGGCTGCTAGGATCAAAAGCATTCCAGGCAGGCTCTCTTCATTGTG ACGTCTGGCGTGGGCGAGCGATTGAACTGGCGGGTCACGACGCGATTGCGATATATCCGGTGGGGGGCTGGTGGAAGTCC CACTCCGGGCAACGACGTGTCAATAACAGGGCTCGATATTCCTTGGTTATCTCAATTTCCGCACCTGGTTGCGCGGTGGA CCTTCATGCTGAAGTAGAGGCATTGGTTCACGCAAAAGCGATTGAGGTTGCGGTTGAGGCTACTAACGCTTGA
Upstream 100 bases:
>100_bases GGCAAGCTTTAGACAACCGGCGTTTACTCAAGAAAAAATTTCAACGCTCCGCTCATAATTAATTCATTGATCGCGGTACC AAGTGGGGGATGGACTATAC
Downstream 100 bases:
>100_bases GTCGGCACGTGGTGGGGGCATCTCTGCTCGCGTGTCATGATGAATCCAGAAGTTAGACTGCCTCAACCCCTGGAGTGCAT AGTCCTGATGGACTGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 850; Mature: 849
Protein sequence:
>850_residues MPGTNDFDIRNRPHIPIERFRESSTYTYPSRNQKRKPLRGDYAAHAAKLLEQLSSALGDLPPRSTDARRIVPGLKLGTVV EVTTIAPSGPRAQAAKIPASLDFPVQDVVVLRAERNSDRTESALLFVPDDARAFLKDRITEYGRAPDPDHRPDINRFEIL EQVDAAGPEALFTGSVDLNDPAIVWWELWVRQPTVQIDQIVAAARTAQIDVHEDRLLFPDTAVLFLHAAAATIAAFATSL PGAITDIRQATGTIETFLTQGRSAIGPQQWMHDLADRVVPATDGAPVVCLLDTGVSARHPLIAPALRGAWSYDEAWGVDD HGLHGGHGTPLAGLVLYGDLEPLMNDSRYVFLTHDAESMKLLPPRGFPPTKPPSYGVVTQGAVSAVEIERPGAKRIFCIA CSTEDLPPDRPSTWSGALDQIASGSMPGEASAVPTALERPKRLLVVATGNVQNGMIPDVLTSQPLEDPAQSWNALTIGGF TRKDLPPRTPTGLKPAVPANHRSPFSRGSQSLPSDLTPIKPEVLFEAGNMLADASGFCEWGPSVSLLSTGSNVAHEPLVP MWATSAATGMAGHFLGRLQAALPSFWPETLRALVVDSARWTEPMRKKLIGTGAHWKTGTKKQFQAQLREVGYGVPDLERA TLSAANDATLIAQSEIQPYALGSDGKTGVFNQVHFYDLPWPKSALEQLENEVVSMKVTLSYFIEPNLTGKAATRPETYRS FGLRFEMKKRGETNARFKHRISSSQQKDGSESEQEASYWLLGSKAFQAGSLHCDVWRGRAIELAGHDAIAIYPVGGWWKS HSGQRRVNNRARYSLVISISAPGCAVDLHAEVEALVHAKAIEVAVEATNA
Sequences:
>Translated_850_residues MPGTNDFDIRNRPHIPIERFRESSTYTYPSRNQKRKPLRGDYAAHAAKLLEQLSSALGDLPPRSTDARRIVPGLKLGTVV EVTTIAPSGPRAQAAKIPASLDFPVQDVVVLRAERNSDRTESALLFVPDDARAFLKDRITEYGRAPDPDHRPDINRFEIL EQVDAAGPEALFTGSVDLNDPAIVWWELWVRQPTVQIDQIVAAARTAQIDVHEDRLLFPDTAVLFLHAAAATIAAFATSL PGAITDIRQATGTIETFLTQGRSAIGPQQWMHDLADRVVPATDGAPVVCLLDTGVSARHPLIAPALRGAWSYDEAWGVDD HGLHGGHGTPLAGLVLYGDLEPLMNDSRYVFLTHDAESMKLLPPRGFPPTKPPSYGVVTQGAVSAVEIERPGAKRIFCIA CSTEDLPPDRPSTWSGALDQIASGSMPGEASAVPTALERPKRLLVVATGNVQNGMIPDVLTSQPLEDPAQSWNALTIGGF TRKDLPPRTPTGLKPAVPANHRSPFSRGSQSLPSDLTPIKPEVLFEAGNMLADASGFCEWGPSVSLLSTGSNVAHEPLVP MWATSAATGMAGHFLGRLQAALPSFWPETLRALVVDSARWTEPMRKKLIGTGAHWKTGTKKQFQAQLREVGYGVPDLERA TLSAANDATLIAQSEIQPYALGSDGKTGVFNQVHFYDLPWPKSALEQLENEVVSMKVTLSYFIEPNLTGKAATRPETYRS FGLRFEMKKRGETNARFKHRISSSQQKDGSESEQEASYWLLGSKAFQAGSLHCDVWRGRAIELAGHDAIAIYPVGGWWKS HSGQRRVNNRARYSLVISISAPGCAVDLHAEVEALVHAKAIEVAVEATNA >Mature_849_residues PGTNDFDIRNRPHIPIERFRESSTYTYPSRNQKRKPLRGDYAAHAAKLLEQLSSALGDLPPRSTDARRIVPGLKLGTVVE VTTIAPSGPRAQAAKIPASLDFPVQDVVVLRAERNSDRTESALLFVPDDARAFLKDRITEYGRAPDPDHRPDINRFEILE QVDAAGPEALFTGSVDLNDPAIVWWELWVRQPTVQIDQIVAAARTAQIDVHEDRLLFPDTAVLFLHAAAATIAAFATSLP GAITDIRQATGTIETFLTQGRSAIGPQQWMHDLADRVVPATDGAPVVCLLDTGVSARHPLIAPALRGAWSYDEAWGVDDH GLHGGHGTPLAGLVLYGDLEPLMNDSRYVFLTHDAESMKLLPPRGFPPTKPPSYGVVTQGAVSAVEIERPGAKRIFCIAC STEDLPPDRPSTWSGALDQIASGSMPGEASAVPTALERPKRLLVVATGNVQNGMIPDVLTSQPLEDPAQSWNALTIGGFT RKDLPPRTPTGLKPAVPANHRSPFSRGSQSLPSDLTPIKPEVLFEAGNMLADASGFCEWGPSVSLLSTGSNVAHEPLVPM WATSAATGMAGHFLGRLQAALPSFWPETLRALVVDSARWTEPMRKKLIGTGAHWKTGTKKQFQAQLREVGYGVPDLERAT LSAANDATLIAQSEIQPYALGSDGKTGVFNQVHFYDLPWPKSALEQLENEVVSMKVTLSYFIEPNLTGKAATRPETYRSF GLRFEMKKRGETNARFKHRISSSQQKDGSESEQEASYWLLGSKAFQAGSLHCDVWRGRAIELAGHDAIAIYPVGGWWKSH SGQRRVNNRARYSLVISISAPGCAVDLHAEVEALVHAKAIEVAVEATNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92307; Mature: 92176
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTNDFDIRNRPHIPIERFRESSTYTYPSRNQKRKPLRGDYAAHAAKLLEQLSSALGDL CCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PPRSTDARRIVPGLKLGTVVEVTTIAPSGPRAQAAKIPASLDFPVQDVVVLRAERNSDRT CCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCHHEEEEEEECCCCCCC ESALLFVPDDARAFLKDRITEYGRAPDPDHRPDINRFEILEQVDAAGPEALFTGSVDLND CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC PAIVWWELWVRQPTVQIDQIVAAARTAQIDVHEDRLLFPDTAVLFLHAAAATIAAFATSL CEEEEEEEECCCCCHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHC PGAITDIRQATGTIETFLTQGRSAIGPQQWMHDLADRVVPATDGAPVVCLLDTGVSARHP CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCC LIAPALRGAWSYDEAWGVDDHGLHGGHGTPLAGLVLYGDLEPLMNDSRYVFLTHDAESMK CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCEEEEEEECCCCCE LLPPRGFPPTKPPSYGVVTQGAVSAVEIERPGAKRIFCIACSTEDLPPDRPSTWSGALDQ ECCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH IASGSMPGEASAVPTALERPKRLLVVATGNVQNGMIPDVLTSQPLEDPAQSWNALTIGGF HHCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHCCCEEEECCC TRKDLPPRTPTGLKPAVPANHRSPFSRGSQSLPSDLTPIKPEVLFEAGNMLADASGFCEW CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCC GPSVSLLSTGSNVAHEPLVPMWATSAATGMAGHFLGRLQAALPSFWPETLRALVVDSARW CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHH TEPMRKKLIGTGAHWKTGTKKQFQAQLREVGYGVPDLERATLSAANDATLIAQSEIQPYA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCEE LGSDGKTGVFNQVHFYDLPWPKSALEQLENEVVSMKVTLSYFIEPNLTGKAATRPETYRS ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCHHHHH FGLRFEMKKRGETNARFKHRISSSQQKDGSESEQEASYWLLGSKAFQAGSLHCDVWRGRA HCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHCEEEEEECCCCCCCCEEEEECCCCE IELAGHDAIAIYPVGGWWKSHSGQRRVNNRARYSLVISISAPGCAVDLHAEVEALVHAKA EEEECCCEEEEEECCCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHE IEVAVEATNA EEEEEEECCC >Mature Secondary Structure PGTNDFDIRNRPHIPIERFRESSTYTYPSRNQKRKPLRGDYAAHAAKLLEQLSSALGDL CCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC PPRSTDARRIVPGLKLGTVVEVTTIAPSGPRAQAAKIPASLDFPVQDVVVLRAERNSDRT CCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCHHEEEEEEECCCCCCC ESALLFVPDDARAFLKDRITEYGRAPDPDHRPDINRFEILEQVDAAGPEALFTGSVDLND CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCC PAIVWWELWVRQPTVQIDQIVAAARTAQIDVHEDRLLFPDTAVLFLHAAAATIAAFATSL CEEEEEEEECCCCCHHHHHHHHHHHHEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHC PGAITDIRQATGTIETFLTQGRSAIGPQQWMHDLADRVVPATDGAPVVCLLDTGVSARHP CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCC LIAPALRGAWSYDEAWGVDDHGLHGGHGTPLAGLVLYGDLEPLMNDSRYVFLTHDAESMK CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCEEEEEEECCCCCE LLPPRGFPPTKPPSYGVVTQGAVSAVEIERPGAKRIFCIACSTEDLPPDRPSTWSGALDQ ECCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH IASGSMPGEASAVPTALERPKRLLVVATGNVQNGMIPDVLTSQPLEDPAQSWNALTIGGF HHCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCCHHHCCCEEEECCC TRKDLPPRTPTGLKPAVPANHRSPFSRGSQSLPSDLTPIKPEVLFEAGNMLADASGFCEW CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCC GPSVSLLSTGSNVAHEPLVPMWATSAATGMAGHFLGRLQAALPSFWPETLRALVVDSARW CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHH TEPMRKKLIGTGAHWKTGTKKQFQAQLREVGYGVPDLERATLSAANDATLIAQSEIQPYA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCEE LGSDGKTGVFNQVHFYDLPWPKSALEQLENEVVSMKVTLSYFIEPNLTGKAATRPETYRS ECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCHHHHH FGLRFEMKKRGETNARFKHRISSSQQKDGSESEQEASYWLLGSKAFQAGSLHCDVWRGRA HCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHCEEEEEECCCCCCCCEEEEECCCCE IELAGHDAIAIYPVGGWWKSHSGQRRVNNRARYSLVISISAPGCAVDLHAEVEALVHAKA EEEECCCEEEEEECCCCCCCCCCCHHHCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHE IEVAVEATNA EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA