Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is hupE [H]

Identifier: 120612178

GI number: 120612178

Start: 3901611

End: 3902204

Strand: Direct

Name: hupE [H]

Synonym: Aave_3527

Alternate gene names: 120612178

Gene position: 3901611-3902204 (Clockwise)

Preceding gene: 120612177

Following gene: 120612179

Centisome position: 72.89

GC content: 77.95

Gene sequence:

>594_bases
ATGCGCATCGCCCGTTCCCTGTTCCCCGCCCTGCTGGCCGCCGCCGCATTGCCGGCACTGGCCCACACCGGCGCCGATGC
CGGCCACCACCACGGCGTCGCCGCCGGGTTCCTGCACCCGCTGACCGGCATGGACCATCTGGCCGCCATGGTGGCCGTGG
GCCTCTGGAGCGCCCTGGCCGCACGCAGCCGCCGCGAACTGCTGGCGGCGCCCCTGGGCTTCGCCGGCATGCTGCTCGTG
GGCGCGCTGGCGGGGCTGGCGGGCCTGTCGCTGCCTGCGGTGGAGCCCATGATCGCCGCCTCCCTGCTGGTGCTGGGCCT
GCTGGTGGCCACGCAGCGCCGCCTGCCCGCGCCCGCCGCCGCGGCGCTGGTCGGTGTTTTCGCGGTCTTCCACGGCATCG
CCCATGGCCACGAACTGGCCGGCGGCGGCGCAGCCCTGCCCACGCTGGCCGGCATGCTCGCCGCCACCGTGGCCCTGCAT
GCCGGCGGCATCGGCCTGGGCGTGGCCCTGCGCGGCGCCAACCGCTGGCTGCCGCGCGCGGCCGGCGCCGCCGTCGGCCT
CTTCGGCCTCGCCCTGCTGGGCGGCCTGGCCTGA

Upstream 100 bases:

>100_bases
GTGGAAGCCACTTTCCCCGACGGCACCAAGCTCGTCACCGTCCACCAGCCCATCGCCTGACGCGGCCCGCCGCGCGCCCT
TTCCCTCCCGGAGCATCCCC

Downstream 100 bases:

>100_bases
CCGCAAACCGAGGCAAGGAGCGCACCATGGTCCCGGGCGAACTGCTGGTCGATGACGGCGAGCACCCACTCATCCCCTGC
CGGCGCACCGTCACCCTGGT

Product: HupE/UreJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV
GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH
AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA

Sequences:

>Translated_197_residues
MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV
GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH
AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA
>Mature_197_residues
MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALAARSRRELLAAPLGFAGMLLV
GALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAAAALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALH
AGGIGLGVALRGANRWLPRAAGAAVGLFGLALLGGLA

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19200; Mature: 19200

Theoretical pI: Translated: 12.32; Mature: 12.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ARSRRELLAAPLGFAGMLLVGALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALHAGGIGLGVALRGANRWLPRA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCHH
AGAAVGLFGLALLGGLA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIARSLFPALLAAAALPALAHTGADAGHHHGVAAGFLHPLTGMDHLAAMVAVGLWSALA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ARSRRELLAAPLGFAGMLLVGALAGLAGLSLPAVEPMIAASLLVLGLLVATQRRLPAPAA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AALVGVFAVFHGIAHGHELAGGGAALPTLAGMLAATVALHAGGIGLGVALRGANRWLPRA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCHH
AGAAVGLFGLALLGGLA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]