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The map label for this gene is 120612163

Identifier: 120612163

GI number: 120612163

Start: 3883576

End: 3884385

Strand: Reverse

Name: 120612163

Synonym: Aave_3512

Alternate gene names: NA

Gene position: 3884385-3883576 (Counterclockwise)

Preceding gene: 120612164

Following gene: 120612162

Centisome position: 72.57

GC content: 73.09

Gene sequence:

>810_bases
ATGAATTCCCCTCTCGAAGCCGCCCGTGCCGCCGCCATCCACGCCGCGCGCGCAGCCCGCGCCCGCTACCGCGCCGGCGT
GGTGGAGCCCACCGCCGGCCGCGCCCCGGGCATGACCCAGGCCAACATGATCGCCCTGCCGCGCGAGTGGGCCTGGGACT
TCCTGCTCTACGCGCAGCGCAATCCCAAGCCTTGCCCGGTGCTGGACGTGATCGAGGCCGGCAGCCATGCCACCGTGCTG
GCCGAGGGCGCCGACCTGCGCACCGACATTCCGCTCTACCGCGTCTGGCGCGATGGGCGGCTGGCCGGGGAAGTCTCCGA
CGCCACCGCGCTCTGGGCCGGGCAGCCCGACCTCGTCACCTTCCTGATCGGCTGCAGCTTCACCTTCGAGACGCCGCTGC
AGGAAGCCGGCATCGAGGTGCGCCACATCGCCCAGGGCTGCAACGTGCCCATGTACCGCACGCAGCGCATGCGCCGGCCG
GCCGGTCGCCTGCGCGGCGAACTGGTGGTGTCGATGCGGCCCGTTCCCGCCGACCGGGTGGCCGATGCCGTCTCCATCTC
CGGCCGCTTTCCGTCCGTGCACGGCGCGCCCGTGCACGTGGGCGACCCGGCGGCGCTGGGCATCGCCGACCTGGCGCGGC
CCGACTTCGGCGATCCGGTGGAGATCCATCCCGGGGAGGTGCCCGTATTCTGGGCCTGCGGCGTGACGCCCCAGGCCGCC
GTCATGGCCTCGGGCGTGCCCTTCGCCGTCACCCATGCGCCGGGCCACATGTTCATCACCGACGTGCCCGACAGCACCTA
CCACGTCTGA

Upstream 100 bases:

>100_bases
GCCGTGGACATGGCCCGCGCCGTGCGCGGGGCGCTGGAGCGCGAGGGCATCGCCCTGCGCCCCTTTGCATGACGGGCTTG
GCCGAAGAAAGGAGCCGCCG

Downstream 100 bases:

>100_bases
CGGAGTTTCGATTGCGCTTCCTTCCCGTCAACCTCGATGCCCTGCTGGTCGAGCTGGACGACCTGCAGCAGACCCTGGCG
CTGCATGCCTCGCTGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNSPLEAARAAAIHAARAARARYRAGVVEPTAGRAPGMTQANMIALPREWAWDFLLYAQRNPKPCPVLDVIEAGSHATVL
AEGADLRTDIPLYRVWRDGRLAGEVSDATALWAGQPDLVTFLIGCSFTFETPLQEAGIEVRHIAQGCNVPMYRTQRMRRP
AGRLRGELVVSMRPVPADRVADAVSISGRFPSVHGAPVHVGDPAALGIADLARPDFGDPVEIHPGEVPVFWACGVTPQAA
VMASGVPFAVTHAPGHMFITDVPDSTYHV

Sequences:

>Translated_269_residues
MNSPLEAARAAAIHAARAARARYRAGVVEPTAGRAPGMTQANMIALPREWAWDFLLYAQRNPKPCPVLDVIEAGSHATVL
AEGADLRTDIPLYRVWRDGRLAGEVSDATALWAGQPDLVTFLIGCSFTFETPLQEAGIEVRHIAQGCNVPMYRTQRMRRP
AGRLRGELVVSMRPVPADRVADAVSISGRFPSVHGAPVHVGDPAALGIADLARPDFGDPVEIHPGEVPVFWACGVTPQAA
VMASGVPFAVTHAPGHMFITDVPDSTYHV
>Mature_269_residues
MNSPLEAARAAAIHAARAARARYRAGVVEPTAGRAPGMTQANMIALPREWAWDFLLYAQRNPKPCPVLDVIEAGSHATVL
AEGADLRTDIPLYRVWRDGRLAGEVSDATALWAGQPDLVTFLIGCSFTFETPLQEAGIEVRHIAQGCNVPMYRTQRMRRP
AGRLRGELVVSMRPVPADRVADAVSISGRFPSVHGAPVHVGDPAALGIADLARPDFGDPVEIHPGEVPVFWACGVTPQAA
VMASGVPFAVTHAPGHMFITDVPDSTYHV

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=240, Percent_Identity=31.6666666666667, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI156139133, Length=242, Percent_Identity=31.8181818181818, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI156139131, Length=242, Percent_Identity=31.8181818181818, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI156139129, Length=242, Percent_Identity=31.8181818181818, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI156139137, Length=242, Percent_Identity=29.7520661157025, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3512_ACIAC (A1TSX9)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_971841.1
- ProteinModelPortal:   A1TSX9
- SMR:   A1TSX9
- STRING:   A1TSX9
- GeneID:   4665672
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_3512
- NMPDR:   fig|397945.5.peg.3000
- eggNOG:   COG4336
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   AAVE397945:AAVE_3512-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28834; Mature: 28834

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPLEAARAAAIHAARAARARYRAGVVEPTAGRAPGMTQANMIALPREWAWDFLLYAQR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHCCEEEEEECC
NPKPCPVLDVIEAGSHATVLAEGADLRTDIPLYRVWRDGRLAGEVSDATALWAGQPDLVT
CCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCEE
FLIGCSFTFETPLQEAGIEVRHIAQGCNVPMYRTQRMRRPAGRLRGELVVSMRPVPADRV
EEEECCEEECCCHHHHCCEEEEHHCCCCCCHHHHHHHHCHHHHCCCEEEEEECCCCHHHH
ADAVSISGRFPSVHGAPVHVGDPAALGIADLARPDFGDPVEIHPGEVPVFWACGVTPQAA
HHHEEECCCCCCCCCCEEECCCCCHHCHHHHCCCCCCCCEEECCCCCCEEEECCCCCHHH
VMASGVPFAVTHAPGHMFITDVPDSTYHV
HHCCCCCEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNSPLEAARAAAIHAARAARARYRAGVVEPTAGRAPGMTQANMIALPREWAWDFLLYAQR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHCCEEEEEECC
NPKPCPVLDVIEAGSHATVLAEGADLRTDIPLYRVWRDGRLAGEVSDATALWAGQPDLVT
CCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCEE
FLIGCSFTFETPLQEAGIEVRHIAQGCNVPMYRTQRMRRPAGRLRGELVVSMRPVPADRV
EEEECCEEECCCHHHHCCEEEEHHCCCCCCHHHHHHHHCHHHHCCCEEEEEECCCCHHHH
ADAVSISGRFPSVHGAPVHVGDPAALGIADLARPDFGDPVEIHPGEVPVFWACGVTPQAA
HHHEEECCCCCCCCCCEEECCCCCHHCHHHHCCCCCCCCEEECCCCCCEEEECCCCCHHH
VMASGVPFAVTHAPGHMFITDVPDSTYHV
HHCCCCCEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA