Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612160

Identifier: 120612160

GI number: 120612160

Start: 3879435

End: 3879893

Strand: Direct

Name: 120612160

Synonym: Aave_3509

Alternate gene names: NA

Gene position: 3879435-3879893 (Clockwise)

Preceding gene: 120612159

Following gene: 120612166

Centisome position: 72.48

GC content: 62.96

Gene sequence:

>459_bases
TTGAAGAAAGTAGTTTTGTCCCTGCTGGCCTGCTCCATGGCTTCCATCGCCTCGGCCGGGGGCGGCGGGGCTGCGCAGAC
CCCTTCGGTCGACGTCCGCTTCGGCAAGCCCACGTTCACGCAGAAGCTCTTCTACGAGAAGATGTACGAGAAGAAGCCCT
TCGAGGACGCCACCCTCTACTACTACGACAACGGGGTGTACAAGATCATCTCGCCCGGCGAGGAGCACTATGGCGTGTAC
GTGGTGCGCGGCAAGCTCACCGACGACGAGTACGCGGTGAACTTCATCTCCCTGCCCTCGACGGACTGGGGCGGCAAGAC
GGCCATGCACGCCCTGAAGTTCAACCGCAAGACCGGCAAGTTCACGCAGCAGGCCACGTGGGAAGACGATCCGCACATCG
CGCCGCAGTACGGGCGGTTCAGCCAGGAGGTGAACACCATCGCCGATCGCGGCCCGTGA

Upstream 100 bases:

>100_bases
AGGTGCGGGCCTTCGACCAGCTCGACCGTGGCTAGGATCGCCCGGCGGCCTCGCCACGCCTGGCGCGGCCCCTTCCCATC
CATCGGAAAGAGGTGAGTCC

Downstream 100 bases:

>100_bases
AGTGGGAGACCCACGCGAAGCCGGAGCAGCGCGGCCGCTGAGCCCGGGCAGGCCCCGCGCGTCCGTCCGAACGCGGCAGG
GCACTTCGTTCGCCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKKVVLSLLACSMASIASAGGGGAAQTPSVDVRFGKPTFTQKLFYEKMYEKKPFEDATLYYYDNGVYKIISPGEEHYGVY
VVRGKLTDDEYAVNFISLPSTDWGGKTAMHALKFNRKTGKFTQQATWEDDPHIAPQYGRFSQEVNTIADRGP

Sequences:

>Translated_152_residues
MKKVVLSLLACSMASIASAGGGGAAQTPSVDVRFGKPTFTQKLFYEKMYEKKPFEDATLYYYDNGVYKIISPGEEHYGVY
VVRGKLTDDEYAVNFISLPSTDWGGKTAMHALKFNRKTGKFTQQATWEDDPHIAPQYGRFSQEVNTIADRGP
>Mature_152_residues
MKKVVLSLLACSMASIASAGGGGAAQTPSVDVRFGKPTFTQKLFYEKMYEKKPFEDATLYYYDNGVYKIISPGEEHYGVY
VVRGKLTDDEYAVNFISLPSTDWGGKTAMHALKFNRKTGKFTQQATWEDDPHIAPQYGRFSQEVNTIADRGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16951; Mature: 16951

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVLSLLACSMASIASAGGGGAAQTPSVDVRFGKPTFTQKLFYEKMYEKKPFEDATLY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
YYDNGVYKIISPGEEHYGVYVVRGKLTDDEYAVNFISLPSTDWGGKTAMHALKFNRKTGK
EEECCEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCC
FTQQATWEDDPHIAPQYGRFSQEVNTIADRGP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKVVLSLLACSMASIASAGGGGAAQTPSVDVRFGKPTFTQKLFYEKMYEKKPFEDATLY
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
YYDNGVYKIISPGEEHYGVYVVRGKLTDDEYAVNFISLPSTDWGGKTAMHALKFNRKTGK
EEECCEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCC
FTQQATWEDDPHIAPQYGRFSQEVNTIADRGP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA