Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yceI [C]
Identifier: 120612157
GI number: 120612157
Start: 3877723
End: 3878301
Strand: Reverse
Name: yceI [C]
Synonym: Aave_3506
Alternate gene names: 120612157
Gene position: 3878301-3877723 (Counterclockwise)
Preceding gene: 120612158
Following gene: 120612156
Centisome position: 72.45
GC content: 67.18
Gene sequence:
>579_bases ATGAAATTCTCCCCCTCCCTCTTCGCCGGCCTCGCGCTGGCATCTTCCGCGCTGCTGGCCGGCGCGCCCGCCTTCGCGCA GCAGAAGCTGGTGCCCGAGCAGAGCGAGATCACCTTCGTGAGCAAGCAGATGGGCGTGCCCGTCGAGGGCCGCTTCAAGA AGTTCGATGCGCAGGTGGCCTTCGACCCCGCCAAGCTCGCCACGAGCAAGGTCACGATCACGGTGGACACCGGCAGCGCC ACCCTGGGCGTGAAGGAGTCCGATGCCGAGCTGCCCAAGGCCACGTGGTTCAACGTGCCCAGGTTCCCGCAGGCGACCTT CCAGTCCACGGCGATCAAGTCCACCGGCCCGGGCAAGTTCGAGGTGGCCGGCAAGCTGAGCATCAAGGGCGCCACGCAGG ACGTGGTCGCGCCCGTCACGCTCACCCAGAACGGCGCCACCACCATCGCCACCGGCAGCTTCCCGATCAAGCGCCTGGCC TTCAAGATCGGCGAGAACGAGTGGGCCGACACCTCCATGGTCGCCGACGAGGTGCAGGTGAAGTTCAAGCTCGCGCTCAC GGGCGTGGGCAAGCTCTGA
Upstream 100 bases:
>100_bases ATCGGGCGGATGCTGCCCGGCCGTGCCTGACGGGCTGAACAACGGGCAGCCCGAGCCGTCCGTGTCTTGTCACCGAATCA TCGAAGCAACGGAGCGATCC
Downstream 100 bases:
>100_bases GGCCCCCCGGGCCGATCCCCGCGCTTTCCTGTCCCTTTTTGCCTTCCTTCCCTTTTCTTTCAACCGGAGATCCCGACATG CGCAAATCCCTGTTCGCCCT
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKFSPSLFAGLALASSALLAGAPAFAQQKLVPEQSEITFVSKQMGVPVEGRFKKFDAQVAFDPAKLATSKVTITVDTGSA TLGVKESDAELPKATWFNVPRFPQATFQSTAIKSTGPGKFEVAGKLSIKGATQDVVAPVTLTQNGATTIATGSFPIKRLA FKIGENEWADTSMVADEVQVKFKLALTGVGKL
Sequences:
>Translated_192_residues MKFSPSLFAGLALASSALLAGAPAFAQQKLVPEQSEITFVSKQMGVPVEGRFKKFDAQVAFDPAKLATSKVTITVDTGSA TLGVKESDAELPKATWFNVPRFPQATFQSTAIKSTGPGKFEVAGKLSIKGATQDVVAPVTLTQNGATTIATGSFPIKRLA FKIGENEWADTSMVADEVQVKFKLALTGVGKL >Mature_192_residues MKFSPSLFAGLALASSALLAGAPAFAQQKLVPEQSEITFVSKQMGVPVEGRFKKFDAQVAFDPAKLATSKVTITVDTGSA TLGVKESDAELPKATWFNVPRFPQATFQSTAIKSTGPGKFEVAGKLSIKGATQDVVAPVTLTQNGATTIATGSFPIKRLA FKIGENEWADTSMVADEVQVKFKLALTGVGKL
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=158, Percent_Identity=33.5443037974684, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20197; Mature: 20197
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSPSLFAGLALASSALLAGAPAFAQQKLVPEQSEITFVSKQMGVPVEGRFKKFDAQVA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCCCEEECCEEE FDPAKLATSKVTITVDTGSATLGVKESDAELPKATWFNVPRFPQATFQSTAIKSTGPGKF ECHHHHCEEEEEEEEECCCEEECCCCCCCCCCCCEECCCCCCCCCHHHHCEECCCCCCCE EVAGKLSIKGATQDVVAPVTLTQNGATTIATGSFPIKRLAFKIGENEWADTSMVADEVQV EEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHEEE KFKLALTGVGKL EEEEEEEECCCC >Mature Secondary Structure MKFSPSLFAGLALASSALLAGAPAFAQQKLVPEQSEITFVSKQMGVPVEGRFKKFDAQVA CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCCCEEECCEEE FDPAKLATSKVTITVDTGSATLGVKESDAELPKATWFNVPRFPQATFQSTAIKSTGPGKF ECHHHHCEEEEEEEEECCCEEECCCCCCCCCCCCEECCCCCCCCCHHHHCEECCCCCCCE EVAGKLSIKGATQDVVAPVTLTQNGATTIATGSFPIKRLAFKIGENEWADTSMVADEVQV EEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHEEE KFKLALTGVGKL EEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA