Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yceI [C]
Identifier: 120612156
GI number: 120612156
Start: 3877070
End: 3877645
Strand: Reverse
Name: yceI [C]
Synonym: Aave_3505
Alternate gene names: 120612156
Gene position: 3877645-3877070 (Counterclockwise)
Preceding gene: 120612157
Following gene: 120612155
Centisome position: 72.44
GC content: 65.45
Gene sequence:
>576_bases ATGCGCAAATCCCTGTTCGCCCTGGCCGCCGCGGCCGCCCTCGTTGCCGGTGCCGCTCAGGCGGAGACCGCCACGTACAC GGTGGAGCCGACGCACACCTTCGCCACGTTCGAGATCAGCCACTTCGGCGCCAGCGTGAACCGCGGCCGCTTCGACAAGA AGGAAGGCACGATCGCGCTGGACAAGGCCGCCAGGACCGGCAAGGTGGACATCACCTTCCAGATCAACTCCATCAACACC GGCACGCCGCCCTTCGACAAGCACCTGCAGAGCCCCGACATCTTCGACGCGGCCAAGTACCCCACCGCGCGCTTCGTGGG CGACAAGTTCACCTTCGACGGCGACAAGCTGGTGTCCGTGGCCGGCAACCTGACGATCAAGGGCCAGACCCATCCCGCGA CCTTCAAGGCCAACCAGTTCGCCTGCTACCAGAGCCCGATGCTCAAGCGCGAAGTGTGCGGCGGCGATTTCGAGACCACG ATCGACCGCACCCTGTTCGGCCTGGACTACGGCGTGCAGTACGGCTTCCCCAAGAACGTGCGCATCGTGGCGCAGGTCGA GGCCGTCAAGCAGTAA
Upstream 100 bases:
>100_bases TCACGGGCGTGGGCAAGCTCTGAGGCCCCCCGGGCCGATCCCCGCGCTTTCCTGTCCCTTTTTGCCTTCCTTCCCTTTTC TTTCAACCGGAGATCCCGAC
Downstream 100 bases:
>100_bases GCGGCGGCGGTCCCCTGCAGACCAGGGCCATTCCCGTCTTGCCCTGGGCGACGTCCCAGACGGCACAACCGGCATGACGC TTCCCGCGTCTTGCCGGTTT
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRKSLFALAAAAALVAGAAQAETATYTVEPTHTFATFEISHFGASVNRGRFDKKEGTIALDKAARTGKVDITFQINSINT GTPPFDKHLQSPDIFDAAKYPTARFVGDKFTFDGDKLVSVAGNLTIKGQTHPATFKANQFACYQSPMLKREVCGGDFETT IDRTLFGLDYGVQYGFPKNVRIVAQVEAVKQ
Sequences:
>Translated_191_residues MRKSLFALAAAAALVAGAAQAETATYTVEPTHTFATFEISHFGASVNRGRFDKKEGTIALDKAARTGKVDITFQINSINT GTPPFDKHLQSPDIFDAAKYPTARFVGDKFTFDGDKLVSVAGNLTIKGQTHPATFKANQFACYQSPMLKREVCGGDFETT IDRTLFGLDYGVQYGFPKNVRIVAQVEAVKQ >Mature_191_residues MRKSLFALAAAAALVAGAAQAETATYTVEPTHTFATFEISHFGASVNRGRFDKKEGTIALDKAARTGKVDITFQINSINT GTPPFDKHLQSPDIFDAAKYPTARFVGDKFTFDGDKLVSVAGNLTIKGQTHPATFKANQFACYQSPMLKREVCGGDFETT IDRTLFGLDYGVQYGFPKNVRIVAQVEAVKQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=195, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20752; Mature: 20752
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLFALAAAAALVAGAAQAETATYTVEPTHTFATFEISHFGASVNRGRFDKKEGTIAL CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCEEE DKAARTGKVDITFQINSINTGTPPFDKHLQSPDIFDAAKYPTARFVGDKFTFDGDKLVSV ECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCEEEECCCEEEEE AGNLTIKGQTHPATFKANQFACYQSPMLKREVCGGDFETTIDRTLFGLDYGVQYGFPKNV ECCEEEECCCCCCEEECCEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCCC RIVAQVEAVKQ EEEEEEEECCC >Mature Secondary Structure MRKSLFALAAAAALVAGAAQAETATYTVEPTHTFATFEISHFGASVNRGRFDKKEGTIAL CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCEEE DKAARTGKVDITFQINSINTGTPPFDKHLQSPDIFDAAKYPTARFVGDKFTFDGDKLVSV ECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCEEEECCCEEEEE AGNLTIKGQTHPATFKANQFACYQSPMLKREVCGGDFETTIDRTLFGLDYGVQYGFPKNV ECCEEEECCCCCCEEECCEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCCC RIVAQVEAVKQ EEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA