Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612155
Identifier: 120612155
GI number: 120612155
Start: 3876501
End: 3876830
Strand: Reverse
Name: 120612155
Synonym: Aave_3504
Alternate gene names: NA
Gene position: 3876830-3876501 (Counterclockwise)
Preceding gene: 120612156
Following gene: 120612154
Centisome position: 72.43
GC content: 63.33
Gene sequence:
>330_bases GTGATAGCAAGCGACACATCCTCTGCTGCATCCGCTTCCTCCTGTCCGTCGCTGGCGAAGCAGAACCCTGCACAAGCGTC CGGCGAGGTTCACCGATCCGCGCGCGAAGGATACAAGAGCGTCTGGGCGCATGGCGGCATGCCTGGGGCGGCTCGCGCAG GAAGGCCCGGGCCACCTCGACAAGCTCAAGTCAAGGAATGCGTGGAGAACCACATCACGAACAACGGTGGCGATGCCATC AGCGCGGGCACGCTGCTGCGTGCCAAATTCCTGCCAGGGCGGGCGGGAGCGCAGGTCTGGCTTCGCAGTCTTGATTCACG GCATTTTTAG
Upstream 100 bases:
>100_bases TGGTTGATCTTTCGCATGCATGTGAGCGGATTCGGGAAAACATGTCAGTCCGTAAAGAGATCAGGGAGAGGATGGAACCA GGCGACTTCCACCATCCATC
Downstream 100 bases:
>100_bases GGAGGAAATATTATGAGAATTTCGAGTTTCTTTTGTTTTTCAAAACCAGCGGTGTCCGGAGACGATGCAAGCCCTGCATC GACGACTTCGCGAAGGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MIASDTSSAASASSCPSLAKQNPAQASGEVHRSAREGYKSVWAHGGMPGAARAGRPGPPRQAQVKECVENHITNNGGDAI SAGTLLRAKFLPGRAGAQVWLRSLDSRHF
Sequences:
>Translated_109_residues MIASDTSSAASASSCPSLAKQNPAQASGEVHRSAREGYKSVWAHGGMPGAARAGRPGPPRQAQVKECVENHITNNGGDAI SAGTLLRAKFLPGRAGAQVWLRSLDSRHF >Mature_109_residues MIASDTSSAASASSCPSLAKQNPAQASGEVHRSAREGYKSVWAHGGMPGAARAGRPGPPRQAQVKECVENHITNNGGDAI SAGTLLRAKFLPGRAGAQVWLRSLDSRHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11336; Mature: 11336
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASDTSSAASASSCPSLAKQNPAQASGEVHRSAREGYKSVWAHGGMPGAARAGRPGPPR CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QAQVKECVENHITNNGGDAISAGTLLRAKFLPGRAGAQVWLRSLDSRHF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MIASDTSSAASASSCPSLAKQNPAQASGEVHRSAREGYKSVWAHGGMPGAARAGRPGPPR CCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QAQVKECVENHITNNGGDAISAGTLLRAKFLPGRAGAQVWLRSLDSRHF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA