Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612137

Identifier: 120612137

GI number: 120612137

Start: 3850004

End: 3852328

Strand: Reverse

Name: 120612137

Synonym: Aave_3486

Alternate gene names: NA

Gene position: 3852328-3850004 (Counterclockwise)

Preceding gene: 120612138

Following gene: 120612136

Centisome position: 71.97

GC content: 64.73

Gene sequence:

>2325_bases
ATGACACGCCGCGTCACCATCCGGACGCCCCTGGGAGAGCAGCTGCAATTCAGGCAGCTGCGGGGTAGCGAGGAGCTGAG
CCAGCTTTTCTCCTTCGACATCGACCTGCTCTCGGAAGGCCGCGACATCGATCCCAAGGCCTTGCTCGGCAAGACAGCGA
CGGTGGAGATCGAGACCGAAGGCGGCGGCAAGCGGTACCTGGACGGCCTGGTCACGCGCTTCGGCATGCAGGGGCAGGAC
CATCGGCTGTACTCCTACCACCTGCGCCTGCAGCCCTGGCTCTGGGTGGCCACGCGGCGGCAGGACTTCCGCATCTTCCA
GTTCAAGACCGTCCCGCAGATCGTGCAGGAGGTGCTGGGCCGCTACGGTTATCCGCTGCAGTTGAAGCTCACGCGCGCGT
ACCGCGCCTGGGACTACTGCGTGCAGTACGGCGAGAGCGACTTCGACTTCGTCTCCCGCCTCTTGGAGCATGAGGGCGCG
TACTACTACTTCCAGCACGCGAGCGGCCAGCACACCCTGGTGATCGCCGATGACATCGTGGCCGGGCACGAACCGCTGCC
GGGCGCGGCGGTGATCCCGTTCTACCCGCCTGAGAAGTCGGCCGTGGCCGACCGCGAGAACATCCATGCCTGGACGCTGG
GCGAGGAGATCAAGCCGGGCCGGTACTACAACGACGACTACGACTTCAAGAAGCCGAGGTCGGACCTGTCCAACATGCGC
CAGCAGCCTCCGGGCCATGCGCACGATGCCTACGAGATCTACGAATGGCCGGGCGGCTACGTGCAGCACGGCGACGGCGA
GCAGTACGCCCGCGTGCGGCTGCAGGAAGGCCTGACCGGGCACAGCACCGTCAGGGGCGAATCGCGCCACAGGAGCCTGG
CGCCGGGCTACACCTTCACGCTGGAGAACTACCCGCGCGGCGACCAGAACCGGCAGTACCTCATCACCGGCGTCACCTAC
CACCTGCACGAGAACCCGCGGACATCTTCAGCCAACAGCGCCAGGCCCGGCGAGACGCTCAAGCACAACGAAGAGCACGG
CTCCTTCCAGAAGTTCAGCCTCACGGCCCAGCCCACGAGCCTGCCCTATACCCCCGCCAGAAAGACCCCGAAGCCGCGCA
CCACCGGCCCGCAGACCGCCGTCGTGGTCGGCCCGGCCGGGGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTG
CAGTTCCACTGGGACCGGCTGGGGGCGATGGACGAGAACTCCAGTTGCTGGATGCGGGTGGCCACGAGCTGGGCGGGCTC
GGGCTTCGGTGCGATCTCGATCCCACGCATTGGCCAAGAAGTCATAGTGGACTTCCTGAACGGCGACCCCGACTATCCCA
TCGTCACCGGCAGCGTCTATAACGCCGCGAACATGCCGCCCTGGGCCTTGCCGGGCAACGCCACGCAGTCGGGCATCAAG
ACGAAGTCCAGCAAGGGCGGGGCGTTCGGCGACGGGATGAAGAACGGCGCGGGCGATGCCAACGCGATCTGCTTCGAGGA
CAAGAAGGGCGCGGAGCAGGTGTGGCTGCATGCGCAGAAGGACCAGCTCACCGAAGTCGAGAACGATGAGGATAAGTGGG
TGGGAAATGACCGGCGAAAAACGATCGACCGGGACGAGACCACCATCGTGCATCGCGACCGGACAGAAACTGTGGACCGC
GACGAGAAGATCACGGTGCACAACAACCGCACGGAGCGGGTGGACCATGACGAGACGATCTCGATCGGCGACAACCGGAA
CGAAGATGTCGGCATCGACGAGACGGTTTCCATCGGCAAGAACCGCACGAAGACCATCGGCCGCAACGAGAAGGACAGGA
TCGGCAACAACTGGTCGATCAAGGTCGGCAGCTTCAAGACCGAAACCATCGGCCTGGCCTACATGCAGAACGTGGGCCTG
GCCAAGATGGTGAACATCGGCGCGGCCTACAACGTGAACGTGGGCGCGGCGATGGTGGTGAACGTGGGGCTCAACCAGTC
CACCAACGTGCTCATGAACCGGTCCGTCACCGTGGGACAGAGCCAGACCACGAAGGTCGGCGCGGATCGCACGGACGAGA
CGTCCGACAACTACACGGAGAACGTGGGCAAGAACTCGGCCACCACCGTGGGCGAAGTGCGCACCCTGAGCGTGGGCAAG
GAAATGTCCGTCAAGGTCGGCGACGCGATCGAGATCCAGTGCGGCAAGGCCGTGCTGCGCATGACCAGCGACGGCACGGT
GCAGATCAACGGGCAGACGATTTCCATCGCGGGCAGCTCCAAGGTGACGGTCTCGTCGCCGGACAGCCACGTCAATCCTG
CGTGA

Upstream 100 bases:

>100_bases
TTACATTTCCAGAAAGCTATCCAATCCATAGACGTCCCACCTATCATCGCGACCGTCTCTAACCCTCGGACGCGGTTCAG
CCGTGTCCCTCGCAACCAAG

Downstream 100 bases:

>100_bases
GGCGGGAAAAACAGGAGAGGAGGGTTCCGATGGCACAAGCGCAGGCTGTTTCCATCCCGGCGGACGACGCCGCGCCACGT
GCCGATGCGGGTGCGGCGCC

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 774; Mature: 773

Protein sequence:

>774_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETTIVHRDRTETVDR
DEKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGKNRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGL
AKMVNIGAAYNVNVGAAMVVNVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA

Sequences:

>Translated_774_residues
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQD
HRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGA
YYYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTY
HLHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKV
QFHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
TKSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETTIVHRDRTETVDR
DEKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGKNRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGL
AKMVNIGAAYNVNVGAAMVVNVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA
>Mature_773_residues
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETEGGGKRYLDGLVTRFGMQGQDH
RLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLGRYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAY
YYFQHASGQHTLVIADDIVAGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMRQ
QPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFTLENYPRGDQNRQYLITGVTYH
LHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTSLPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQ
FHWDRLGAMDENSSCWMRVATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIKT
KSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRKTIDRDETTIVHRDRTETVDRD
EKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGKNRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGLA
KMVNIGAAYNVNVGAAMVVNVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGKE
MSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86204; Mature: 86073

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEEEC
GGGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHH
RYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIV
HCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEE
AGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHHH
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFT
HCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
LENYPRGDQNRQYLITGVTYHLHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTS
ECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCC
LPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEE
ATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
EECCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
TKSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCCCHHH
TIDRDETTIVHRDRTETVDRDEKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGK
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCC
NRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGLAKMVNIGAAYNVNVGAAMVV
CCCHHCCCCCHHHCCCCEEEEECCEECCCEEHHHHHCCCHHHHEECCCEEECCCCEEEEE
NVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EECCCCCCCEEEECEEEECCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCC
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA
CEEEEECCEEEEEECCEEEEECCCCEEEECCEEEEEECCCEEEEECCCCCCCCC
>Mature Secondary Structure 
TRRVTIRTPLGEQLQFRQLRGSEELSQLFSFDIDLLSEGRDIDPKALLGKTATVEIETE
CCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEEEEEC
GGGKRYLDGLVTRFGMQGQDHRLYSYHLRLQPWLWVATRRQDFRIFQFKTVPQIVQEVLG
CCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCEEEEEECCHHHHHHHHHH
RYGYPLQLKLTRAYRAWDYCVQYGESDFDFVSRLLEHEGAYYYFQHASGQHTLVIADDIV
HCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEEECCEE
AGHEPLPGAAVIPFYPPEKSAVADRENIHAWTLGEEIKPGRYYNDDYDFKKPRSDLSNMR
CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHHH
QQPPGHAHDAYEIYEWPGGYVQHGDGEQYARVRLQEGLTGHSTVRGESRHRSLAPGYTFT
HCCCCCCCCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE
LENYPRGDQNRQYLITGVTYHLHENPRTSSANSARPGETLKHNEEHGSFQKFSLTAQPTS
ECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCC
LPYTPARKTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHWDRLGAMDENSSCWMRV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCCEEEEE
ATSWAGSGFGAISIPRIGQEVIVDFLNGDPDYPIVTGSVYNAANMPPWALPGNATQSGIK
EECCCCCCCCEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
TKSSKGGAFGDGMKNGAGDANAICFEDKKGAEQVWLHAQKDQLTEVENDEDKWVGNDRRK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCCCHHH
TIDRDETTIVHRDRTETVDRDEKITVHNNRTERVDHDETISIGDNRNEDVGIDETVSIGK
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCC
NRTKTIGRNEKDRIGNNWSIKVGSFKTETIGLAYMQNVGLAKMVNIGAAYNVNVGAAMVV
CCCHHCCCCCHHHCCCCEEEEECCEECCCEEHHHHHCCCHHHHEECCCEEECCCCEEEEE
NVGLNQSTNVLMNRSVTVGQSQTTKVGADRTDETSDNYTENVGKNSATTVGEVRTLSVGK
EECCCCCCCEEEECEEEECCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEECCC
EMSVKVGDAIEIQCGKAVLRMTSDGTVQINGQTISIAGSSKVTVSSPDSHVNPA
CEEEEECCEEEEEECCEEEEECCCCEEEECCEEEEEECCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA