Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612127
Identifier: 120612127
GI number: 120612127
Start: 3836486
End: 3837028
Strand: Reverse
Name: 120612127
Synonym: Aave_3474
Alternate gene names: NA
Gene position: 3837028-3836486 (Counterclockwise)
Preceding gene: 120612128
Following gene: 120612126
Centisome position: 71.68
GC content: 50.64
Gene sequence:
>543_bases GTGATGGATAAGTCTATTTTTCCCTCGGACGTTGTTGAAGTATTCGATTTCATCGTCCATGGCGAGGTGTTGGTGGCTGC TTATGCAGGGGCCGGATCCCCCGGTCTCATGCTCAATGACATGAGAGCCGCGCTGGAGCGCTACACCAACCAGGATGTCG AGCCCCCGGATCATTTTTTGCTCGACATCACAGCGGATGCCGCTGGCGAAATTCCTGTGAAATCGGAAATTAAGGAATTC TCGGAATTGAAGCGTAAGCTGGTGGAATATGATGAGCAGGAGGATTTTTATGAAATAGTCCTGCGGAAAATTTCCTCGGT TTCAGAAGATCTTGAAATCAATGCAGCGCAATCCAGGCTGCTGGCGGACGCCATCAGCGGGGACTTGTACAAATGCGCAG AGGCCCGGCTTTGCCTGAAAAGATCGCATCCATATTTCGAGAGGGTTTTCGAAATCTACAAGAACCACGGATTCCCTTGC GGTTGGAGGGGCGGGGATAACTGGAGAGACGGTGATTTCTACATTTACAGTCGCCGTCAATGA
Upstream 100 bases:
>100_bases CCCTGGCTCCAGGATTCAAATTTATTGTGGATGGGGACGGATACGAGGATGTGTGGTTTGATTCCTCTTCCTTAAAGAGG GCCGGGCAATCTGGGGCTGG
Downstream 100 bases:
>100_bases TGATTGAGAGCAATGGAATGCTTGCTGACTTTACCAGCCTGATCCGATCCGCTGCCAGGGAGGCTTTTCAAAAAATCCGG GAAGACCATCGTGGGGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MMDKSIFPSDVVEVFDFIVHGEVLVAAYAGAGSPGLMLNDMRAALERYTNQDVEPPDHFLLDITADAAGEIPVKSEIKEF SELKRKLVEYDEQEDFYEIVLRKISSVSEDLEINAAQSRLLADAISGDLYKCAEARLCLKRSHPYFERVFEIYKNHGFPC GWRGGDNWRDGDFYIYSRRQ
Sequences:
>Translated_180_residues MMDKSIFPSDVVEVFDFIVHGEVLVAAYAGAGSPGLMLNDMRAALERYTNQDVEPPDHFLLDITADAAGEIPVKSEIKEF SELKRKLVEYDEQEDFYEIVLRKISSVSEDLEINAAQSRLLADAISGDLYKCAEARLCLKRSHPYFERVFEIYKNHGFPC GWRGGDNWRDGDFYIYSRRQ >Mature_180_residues MMDKSIFPSDVVEVFDFIVHGEVLVAAYAGAGSPGLMLNDMRAALERYTNQDVEPPDHFLLDITADAAGEIPVKSEIKEF SELKRKLVEYDEQEDFYEIVLRKISSVSEDLEINAAQSRLLADAISGDLYKCAEARLCLKRSHPYFERVFEIYKNHGFPC GWRGGDNWRDGDFYIYSRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20613; Mature: 20613
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDKSIFPSDVVEVFDFIVHGEVLVAAYAGAGSPGLMLNDMRAALERYTNQDVEPPDHFL CCCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE LDITADAAGEIPVKSEIKEFSELKRKLVEYDEQEDFYEIVLRKISSVSEDLEINAAQSRL EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEHHHHHHHH LADAISGDLYKCAEARLCLKRSHPYFERVFEIYKNHGFPCGWRGGDNWRDGDFYIYSRRQ HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure MMDKSIFPSDVVEVFDFIVHGEVLVAAYAGAGSPGLMLNDMRAALERYTNQDVEPPDHFL CCCCCCCHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEE LDITADAAGEIPVKSEIKEFSELKRKLVEYDEQEDFYEIVLRKISSVSEDLEINAAQSRL EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEHHHHHHHH LADAISGDLYKCAEARLCLKRSHPYFERVFEIYKNHGFPCGWRGGDNWRDGDFYIYSRRQ HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA