Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612043
Identifier: 120612043
GI number: 120612043
Start: 3745492
End: 3747651
Strand: Reverse
Name: 120612043
Synonym: Aave_3389
Alternate gene names: NA
Gene position: 3747651-3745492 (Counterclockwise)
Preceding gene: 120612044
Following gene: 120612042
Centisome position: 70.01
GC content: 70.69
Gene sequence:
>2160_bases ATGCATTTTCCCGGAGCCATTTCCCGGCGCGCCCGTCCGCGGCGCCCATTCCCCGCGGCCGCCGCCGCGGCGCTCGCGGC CACCGCGCTGCTGACCGCATGTGGCGGCGGCGGTTCATCGACGCTGGCGGACGGTGCGCCGAAGCTGCGCTTCACCATCG CTGCCACGGAAGACTTTCCGGGCAGCTACGGCAGCGTGGGCGCGTATGAAAAGGTGTCGGGCACGGTACAGGGCGAAATC GATCCGGCGGATCCGCGCAATGCCGTGATCCAGGATCTGCAGCTCGCGCCGCGCAACAGCCGCGGCATGGTGGAATACAG CGCCGACTTCGTGCTGCTCAAGCCCAAGGACATGTCCAAGGCCGGGGGCGTGCTGCGCTACGACGCACCCAACCGCGGCA ACATCCTCACGCTGCCCAATCCGGCGGCCGTGCCGGGCGACGCGGTGTATTTCGAGCGGGGCTATACCTTTCTCTATTCC GCATGGCAGGGCGACGTGCCCAAGAGTTCGCCCGCGCGGCTCACGGCCACCGTGCCCGTGGCCCGCAATGCCGACGGCAG CAGCATCACCGGCCCGTACCGCACGGAGCTGGTGCCCACCGCCGCGGTCGCGGCCATGGCGCTGCCCGGAGGCGTCTTCA ATGGCACCATGATTCCCTACGAGCCCGCGGCACTGGACAACACGCAGCCGGGCTATTCGCTCACGCGCCGCCGCAACGAG ACCGATCCGCGCGAAGCCATACCGGCTGCGGACTGGAAGTTCGCCGCCTGCGATACCGGGGCCAACCCGTTCCCCGGCAC GCCCAGCCCCGCCAGTGTCTGCCTGCGCGGCGGGTTCGATCCGCAGTATCTGTACGAACTGGTCTATGTGGCCAAGGATC CGAAGGTCATGGGCGTGGGGCTCGCTGCGCTGCGCGATACCGTGGGCTTTTTCCGCGGCAGGGCCGCCGACGCGGACGGC CGGGCCAATCCGCTGGCGGGCCGCATCACGCACGTGATCGGACAGGGCACGTCCCAGTCGGGCAATGCGATGAAGACCTT CCTGCACCTGGGTTTCAACCAGCGGCTGGATGGGGGCATGGTGTTCGACGGCATCTACGCCCATGTGGCGGCGCGGCAGA CCAACGTGAACACCCGCTTCGCCGTGCCCGGCGGCGGTGGTGGCCTGCGCACCGACCATACGGCCTTCGGGCAGACGGCG CCGCGCGGCCTGGCGGCGGATTACGTGGATGCGGTGAGCGGCCGCGAGGGCGGGGTGATGCGCCGCTGCAGCGCGACCGG CACCTGCCCGCGCTTCTTCCTGGGCCTGTCGGGCACCGAGTTCTGGCAACTGCAGGGCTCGCCCGTGCTCACCGATGCGC GGGGCCAGCGCGACATCGCCCAGCCCGCCAATGCGCGCATCTACTACTACGCGAGCACGCAGCACGGCGGGGCGGGCGGG GTGGAAAGCATCAGCTACGCGCCTTCGCGCACCGTCTATCCCGCCGGCACCGTGGTGCATTTCAACGACACCTTCCGGGC CCTGTTCCTCGCGCTGGAGGACTGGGTGGTGCGCGGCGCCGAGCCGCCGGCCAGCCAGGTGCCCCGCATCGCGGACGGCA CGCTGGTGCGTCCGGCCCAGGTCGCCTATCCGGCCATGAAGGGGCTGACCTGGAGCGCGGGCGGCGTGCGGGCACCGATT CCGGAATTCCGTTACCAGGCGCGCTACAACGGCTTTACCCTGCTGGACTTCGGGCCGCAGTACGTTCCACAGGACGAGTC GGGCATCGCCACGGTGCTGCCTCCGCGGGTGGTGGGGCGTGACTACGCCATCCTGGTGCCGCAGGTGGATCCGGCGACGG GGCTGGCGCAGGCCGGCATCCAGAGCGTGGAGGCCCAGGCGCCGCTGGGCACGAGCATCGAGTTCAACGAGGTGGCCACG CCCGGCATCGTTGATCTCGCGAACCTCACGGGCAGCTTCATCCCGTTCCACAAGACACGCGCGGCGCGCCTGGCCGCCGG CGACGGGCGGCCGTCGCTGGAGGAACTGTACGGCTCGCAGGCGGGATACGTGGCCGCCGTGTCCCGTGCCGCCGACGGGC TGGTGGCGCAGCGCCTGCTGCTGCGCCGCGACGCCGACGCGATCGTGGCCAGGGCGCGGGCGGCCAACATCCTGCCCTGA
Upstream 100 bases:
>100_bases CGCATGGCGTCGCGCATCGCCAGGGGCGGTCGCGCCCCGGAGTCCGGCGTTCCTGGCGGCGGCTTGCGCATTCCACAACG ACCACACTGGAGACATCGCC
Downstream 100 bases:
>100_bases ACGCCACCGGGCGCCCCGGGACGCCTTTGCGCCGGGGCGGATGCTGTCGGGGAGTGCGGCGGTGTGACGCGGCGGGCTGT ACGTGCCGGCCGGGGGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 719; Mature: 719
Protein sequence:
>719_residues MHFPGAISRRARPRRPFPAAAAAALAATALLTACGGGGSSTLADGAPKLRFTIAATEDFPGSYGSVGAYEKVSGTVQGEI DPADPRNAVIQDLQLAPRNSRGMVEYSADFVLLKPKDMSKAGGVLRYDAPNRGNILTLPNPAAVPGDAVYFERGYTFLYS AWQGDVPKSSPARLTATVPVARNADGSSITGPYRTELVPTAAVAAMALPGGVFNGTMIPYEPAALDNTQPGYSLTRRRNE TDPREAIPAADWKFAACDTGANPFPGTPSPASVCLRGGFDPQYLYELVYVAKDPKVMGVGLAALRDTVGFFRGRAADADG RANPLAGRITHVIGQGTSQSGNAMKTFLHLGFNQRLDGGMVFDGIYAHVAARQTNVNTRFAVPGGGGGLRTDHTAFGQTA PRGLAADYVDAVSGREGGVMRRCSATGTCPRFFLGLSGTEFWQLQGSPVLTDARGQRDIAQPANARIYYYASTQHGGAGG VESISYAPSRTVYPAGTVVHFNDTFRALFLALEDWVVRGAEPPASQVPRIADGTLVRPAQVAYPAMKGLTWSAGGVRAPI PEFRYQARYNGFTLLDFGPQYVPQDESGIATVLPPRVVGRDYAILVPQVDPATGLAQAGIQSVEAQAPLGTSIEFNEVAT PGIVDLANLTGSFIPFHKTRAARLAAGDGRPSLEELYGSQAGYVAAVSRAADGLVAQRLLLRRDADAIVARARAANILP
Sequences:
>Translated_719_residues MHFPGAISRRARPRRPFPAAAAAALAATALLTACGGGGSSTLADGAPKLRFTIAATEDFPGSYGSVGAYEKVSGTVQGEI DPADPRNAVIQDLQLAPRNSRGMVEYSADFVLLKPKDMSKAGGVLRYDAPNRGNILTLPNPAAVPGDAVYFERGYTFLYS AWQGDVPKSSPARLTATVPVARNADGSSITGPYRTELVPTAAVAAMALPGGVFNGTMIPYEPAALDNTQPGYSLTRRRNE TDPREAIPAADWKFAACDTGANPFPGTPSPASVCLRGGFDPQYLYELVYVAKDPKVMGVGLAALRDTVGFFRGRAADADG RANPLAGRITHVIGQGTSQSGNAMKTFLHLGFNQRLDGGMVFDGIYAHVAARQTNVNTRFAVPGGGGGLRTDHTAFGQTA PRGLAADYVDAVSGREGGVMRRCSATGTCPRFFLGLSGTEFWQLQGSPVLTDARGQRDIAQPANARIYYYASTQHGGAGG VESISYAPSRTVYPAGTVVHFNDTFRALFLALEDWVVRGAEPPASQVPRIADGTLVRPAQVAYPAMKGLTWSAGGVRAPI PEFRYQARYNGFTLLDFGPQYVPQDESGIATVLPPRVVGRDYAILVPQVDPATGLAQAGIQSVEAQAPLGTSIEFNEVAT PGIVDLANLTGSFIPFHKTRAARLAAGDGRPSLEELYGSQAGYVAAVSRAADGLVAQRLLLRRDADAIVARARAANILP >Mature_719_residues MHFPGAISRRARPRRPFPAAAAAALAATALLTACGGGGSSTLADGAPKLRFTIAATEDFPGSYGSVGAYEKVSGTVQGEI DPADPRNAVIQDLQLAPRNSRGMVEYSADFVLLKPKDMSKAGGVLRYDAPNRGNILTLPNPAAVPGDAVYFERGYTFLYS AWQGDVPKSSPARLTATVPVARNADGSSITGPYRTELVPTAAVAAMALPGGVFNGTMIPYEPAALDNTQPGYSLTRRRNE TDPREAIPAADWKFAACDTGANPFPGTPSPASVCLRGGFDPQYLYELVYVAKDPKVMGVGLAALRDTVGFFRGRAADADG RANPLAGRITHVIGQGTSQSGNAMKTFLHLGFNQRLDGGMVFDGIYAHVAARQTNVNTRFAVPGGGGGLRTDHTAFGQTA PRGLAADYVDAVSGREGGVMRRCSATGTCPRFFLGLSGTEFWQLQGSPVLTDARGQRDIAQPANARIYYYASTQHGGAGG VESISYAPSRTVYPAGTVVHFNDTFRALFLALEDWVVRGAEPPASQVPRIADGTLVRPAQVAYPAMKGLTWSAGGVRAPI PEFRYQARYNGFTLLDFGPQYVPQDESGIATVLPPRVVGRDYAILVPQVDPATGLAQAGIQSVEAQAPLGTSIEFNEVAT PGIVDLANLTGSFIPFHKTRAARLAAGDGRPSLEELYGSQAGYVAAVSRAADGLVAQRLLLRRDADAIVARARAANILP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75706; Mature: 75706
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFPGAISRRARPRRPFPAAAAAALAATALLTACGGGGSSTLADGAPKLRFTIAATEDFP CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GSYGSVGAYEKVSGTVQGEIDPADPRNAVIQDLQLAPRNSRGMVEYSADFVLLKPKDMSK CCCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCHH AGGVLRYDAPNRGNILTLPNPAAVPGDAVYFERGYTFLYSAWQGDVPKSSPARLTATVPV HCCEEEECCCCCCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEECE ARNADGSSITGPYRTELVPTAAVAAMALPGGVFNGTMIPYEPAALDNTQPGYSLTRRRNE EECCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC TDPREAIPAADWKFAACDTGANPFPGTPSPASVCLRGGFDPQYLYELVYVAKDPKVMGVG CCHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHEECCCCEEEHH LAALRDTVGFFRGRAADADGRANPLAGRITHVIGQGTSQSGNAMKTFLHLGFNQRLDGGM HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCE VFDGIYAHVAARQTNVNTRFAVPGGGGGLRTDHTAFGQTAPRGLAADYVDAVSGREGGVM EEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE RRCSATGTCPRFFLGLSGTEFWQLQGSPVLTDARGQRDIAQPANARIYYYASTQHGGAGG EECCCCCCCHHHEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC VESISYAPSRTVYPAGTVVHFNDTFRALFLALEDWVVRGAEPPASQVPRIADGTLVRPAQ CCCCCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCHH VAYPAMKGLTWSAGGVRAPIPEFRYQARYNGFTLLDFGPQYVPQDESGIATVLPPRVVGR HHHHHHHCCEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCHHHCC DYAILVPQVDPATGLAQAGIQSVEAQAPLGTSIEFNEVATPGIVDLANLTGSFIPFHKTR CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCEEHHHCCCCCCCCHHCC AARLAAGDGRPSLEELYGSQAGYVAAVSRAADGLVAQRLLLRRDADAIVARARAANILP HHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MHFPGAISRRARPRRPFPAAAAAALAATALLTACGGGGSSTLADGAPKLRFTIAATEDFP CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC GSYGSVGAYEKVSGTVQGEIDPADPRNAVIQDLQLAPRNSRGMVEYSADFVLLKPKDMSK CCCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCHH AGGVLRYDAPNRGNILTLPNPAAVPGDAVYFERGYTFLYSAWQGDVPKSSPARLTATVPV HCCEEEECCCCCCCEEECCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEECE ARNADGSSITGPYRTELVPTAAVAAMALPGGVFNGTMIPYEPAALDNTQPGYSLTRRRNE EECCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC TDPREAIPAADWKFAACDTGANPFPGTPSPASVCLRGGFDPQYLYELVYVAKDPKVMGVG CCHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHEECCCCHHHHHHHHHEECCCCEEEHH LAALRDTVGFFRGRAADADGRANPLAGRITHVIGQGTSQSGNAMKTFLHLGFNQRLDGGM HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCE VFDGIYAHVAARQTNVNTRFAVPGGGGGLRTDHTAFGQTAPRGLAADYVDAVSGREGGVM EEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEE RRCSATGTCPRFFLGLSGTEFWQLQGSPVLTDARGQRDIAQPANARIYYYASTQHGGAGG EECCCCCCCHHHEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCC VESISYAPSRTVYPAGTVVHFNDTFRALFLALEDWVVRGAEPPASQVPRIADGTLVRPAQ CCCCCCCCCCEECCCCEEEEECHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCHH VAYPAMKGLTWSAGGVRAPIPEFRYQARYNGFTLLDFGPQYVPQDESGIATVLPPRVVGR HHHHHHHCCEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCHHHCC DYAILVPQVDPATGLAQAGIQSVEAQAPLGTSIEFNEVATPGIVDLANLTGSFIPFHKTR CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCEEHHHCCCCCCCCHHCC AARLAAGDGRPSLEELYGSQAGYVAAVSRAADGLVAQRLLLRRDADAIVARARAANILP HHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA