Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is caiD [C]
Identifier: 120612032
GI number: 120612032
Start: 3731104
End: 3732195
Strand: Reverse
Name: caiD [C]
Synonym: Aave_3378
Alternate gene names: 120612032
Gene position: 3732195-3731104 (Counterclockwise)
Preceding gene: 120612034
Following gene: 120612027
Centisome position: 69.72
GC content: 71.52
Gene sequence:
>1092_bases ATGGATGCAACGCAACGCGACGTGCTGGCCGAGGTGCGCGGACAGGTGGGCTTCATCACGCTGAACCGCCCGCGCGCGCT CAACGCCCTGTCGCTGGGCATGGTGCGCGACCTGATGGAGGCGCTGCTGCGCTGGCGGTCGGACCCGGCCGTGCACGCCG TGGCGATCCGCGGCACGAACAAGGAAGGCGCCTTCGGCGCGTTCTGCGCGGGCGGGGACATCCGTTTCCTGCACCAGGCC GGCAGCACCGGCAACCCGCAGCTGGAAGACTTCTTCACCGAGGAATACGCCCTCAACCACCTGATCCACACCTTCGGCAA GCCCTACATCGCCTTCATGGACGGCATCGTCATGGGCGGCGGCATGGGCATCAGCCAGGGCGGCAGCCTGCGCATCGTCA CGGAGCGCACGAAGATGGCGATGCCCGAGACGGCCATCGGCCTGTTCCCGGACGTGGGCGGCGGCTACTTCCTGTCGCGC TGCCCCGGCCGCACGGGCGAGTGGCTGGCGCTGACGGGCGACACCATTGGCGCGGGCGATGCGGTGGCGCTGGGCCTGGC CGACGGCTGCATGCCCGCCGAGGCCCAGCACGGCGTCTGGGACGGGCTGGCCACGCAGCGTTTCGACGATGGCGCCGCCA TCGAACGCTGGGTGGCCACGCATTTCACCCCGCCCACGCCCGCCGCCACGGCCGACCGCGCGCGCATCGACGCGGCCTTC GGCCGGGAGAGCGTGCCGGCCATTGTCGCGGCGCTGGAGGCCGACGGCAGCGACTGGGCACGCGCCACGGTGACCACGCT GCGCAAGCGGTCACCGCTGATGCTGCACGTGGTGCTGGAGCAGATCCGGCGCGCGCGGGACATGGACCTGGCCGCCGACC TGCGCATGGAGCGCGACATGGTGCGCCACTGCTTTTACCTGCGGCCCGGCCAGAGCGAGACGGTGGAGGGCATCCGCGCG CTCGCGGTGGACAAAGACCATGCGCCCCGCTGGAACCCGGCGCGCATCGAGGACGTCACGCCCGCGATGTGGCAGCCTTT CTTCGACAGTCCCTGGCCCGCGCATTCCCATCCGCTGGCCGGCCTGCGGTGA
Upstream 100 bases:
>100_bases GCAGCGCTCCGGGCAGGTCCTGTAGGAGACCGGGCACACCGCGCGGCCTGCGGCACAATTTCCGGCACGTTCCAACACAG GATTCCAAGGAGACTATCGA
Downstream 100 bases:
>100_bases ATCACAACTGCGGATGGACGGCCGTGGCGATGGCCAGCAGCGCCTCGCGGGGCAGCGGGCCGCTCAACGCGTAGCCGAAG CCGTCCTCCACCCAGTAGAA
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MDATQRDVLAEVRGQVGFITLNRPRALNALSLGMVRDLMEALLRWRSDPAVHAVAIRGTNKEGAFGAFCAGGDIRFLHQA GSTGNPQLEDFFTEEYALNHLIHTFGKPYIAFMDGIVMGGGMGISQGGSLRIVTERTKMAMPETAIGLFPDVGGGYFLSR CPGRTGEWLALTGDTIGAGDAVALGLADGCMPAEAQHGVWDGLATQRFDDGAAIERWVATHFTPPTPAATADRARIDAAF GRESVPAIVAALEADGSDWARATVTTLRKRSPLMLHVVLEQIRRARDMDLAADLRMERDMVRHCFYLRPGQSETVEGIRA LAVDKDHAPRWNPARIEDVTPAMWQPFFDSPWPAHSHPLAGLR
Sequences:
>Translated_363_residues MDATQRDVLAEVRGQVGFITLNRPRALNALSLGMVRDLMEALLRWRSDPAVHAVAIRGTNKEGAFGAFCAGGDIRFLHQA GSTGNPQLEDFFTEEYALNHLIHTFGKPYIAFMDGIVMGGGMGISQGGSLRIVTERTKMAMPETAIGLFPDVGGGYFLSR CPGRTGEWLALTGDTIGAGDAVALGLADGCMPAEAQHGVWDGLATQRFDDGAAIERWVATHFTPPTPAATADRARIDAAF GRESVPAIVAALEADGSDWARATVTTLRKRSPLMLHVVLEQIRRARDMDLAADLRMERDMVRHCFYLRPGQSETVEGIRA LAVDKDHAPRWNPARIEDVTPAMWQPFFDSPWPAHSHPLAGLR >Mature_363_residues MDATQRDVLAEVRGQVGFITLNRPRALNALSLGMVRDLMEALLRWRSDPAVHAVAIRGTNKEGAFGAFCAGGDIRFLHQA GSTGNPQLEDFFTEEYALNHLIHTFGKPYIAFMDGIVMGGGMGISQGGSLRIVTERTKMAMPETAIGLFPDVGGGYFLSR CPGRTGEWLALTGDTIGAGDAVALGLADGCMPAEAQHGVWDGLATQRFDDGAAIERWVATHFTPPTPAATADRARIDAAF GRESVPAIVAALEADGSDWARATVTTLRKRSPLMLHVVLEQIRRARDMDLAADLRMERDMVRHCFYLRPGQSETVEGIRA LAVDKDHAPRWNPARIEDVTPAMWQPFFDSPWPAHSHPLAGLR
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=354, Percent_Identity=36.1581920903955, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI37594469, Length=310, Percent_Identity=36.4516129032258, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI194097323, Length=193, Percent_Identity=36.2694300518135, Blast_Score=105, Evalue=9e-23, Organism=Escherichia coli, GI221142681, Length=177, Percent_Identity=28.2485875706215, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787659, Length=189, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25144160, Length=362, Percent_Identity=39.7790055248619, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI25144157, Length=362, Percent_Identity=39.5027624309392, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI25145438, Length=186, Percent_Identity=30.6451612903226, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17554946, Length=184, Percent_Identity=29.3478260869565, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17540714, Length=183, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=374, Percent_Identity=28.8770053475936, Blast_Score=136, Evalue=4e-33, Organism=Drosophila melanogaster, GI28571730, Length=348, Percent_Identity=39.367816091954, Blast_Score=229, Evalue=2e-60, Organism=Drosophila melanogaster, GI28571729, Length=348, Percent_Identity=39.367816091954, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI20129971, Length=191, Percent_Identity=34.0314136125654, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24653477, Length=191, Percent_Identity=34.0314136125654, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24653139, Length=178, Percent_Identity=31.4606741573034, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 39497; Mature: 39497
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATQRDVLAEVRGQVGFITLNRPRALNALSLGMVRDLMEALLRWRSDPAVHAVAIRGTN CCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KEGAFGAFCAGGDIRFLHQAGSTGNPQLEDFFTEEYALNHLIHTFGKPYIAFMDGIVMGG CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC GMGISQGGSLRIVTERTKMAMPETAIGLFPDVGGGYFLSRCPGRTGEWLALTGDTIGAGD CCCCCCCCCEEEEECHHHHCCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCC AVALGLADGCMPAEAQHGVWDGLATQRFDDGAAIERWVATHFTPPTPAATADRARIDAAF EEEEECCCCCCCCCCCCCCHHCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GRESVPAIVAALEADGSDWARATVTTLRKRSPLMLHVVLEQIRRARDMDLAADLRMERDM CCCCHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH VRHCFYLRPGQSETVEGIRALAVDKDHAPRWNPARIEDVTPAMWQPFFDSPWPAHSHPLA HHHHEECCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC GLR CCC >Mature Secondary Structure MDATQRDVLAEVRGQVGFITLNRPRALNALSLGMVRDLMEALLRWRSDPAVHAVAIRGTN CCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC KEGAFGAFCAGGDIRFLHQAGSTGNPQLEDFFTEEYALNHLIHTFGKPYIAFMDGIVMGG CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC GMGISQGGSLRIVTERTKMAMPETAIGLFPDVGGGYFLSRCPGRTGEWLALTGDTIGAGD CCCCCCCCCEEEEECHHHHCCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCC AVALGLADGCMPAEAQHGVWDGLATQRFDDGAAIERWVATHFTPPTPAATADRARIDAAF EEEEECCCCCCCCCCCCCCHHCHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH GRESVPAIVAALEADGSDWARATVTTLRKRSPLMLHVVLEQIRRARDMDLAADLRMERDM CCCCHHHHHHEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH VRHCFYLRPGQSETVEGIRALAVDKDHAPRWNPARIEDVTPAMWQPFFDSPWPAHSHPLA HHHHEECCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC GLR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA