Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612019
Identifier: 120612019
GI number: 120612019
Start: 3720530
End: 3721351
Strand: Reverse
Name: 120612019
Synonym: Aave_3365
Alternate gene names: NA
Gene position: 3721351-3720530 (Counterclockwise)
Preceding gene: 120612020
Following gene: 120612018
Centisome position: 69.52
GC content: 66.79
Gene sequence:
>822_bases ATGGATGCTCAAAATTCAGGAAAGCTGAACCGTTTGCTGGCCGAGCTGGGCGATACTCACCTAGTGTCCAGCCGCTGGCT CCGGGCGCACGGCTACTCCAATAGCCTTGTGGCGCGCTATGTGGGCAGCGGCTGGCTGGTGTCGCCGGCGCGTGGTGTCT ACATGCGCAGAGGCGGGCGGCTGCAATGGGATGGTGTGGTCCGCAGCCTGCAGGTCGGCGAGGGCATGCCGCTGCACGTC GGGGGACGCTTCGCGCTCGGCCTGCAGGGCCACGAGCACTACCTGCGCCTGGGCGATGCCGGGACGATCACGCTGTATGG GCCACAGCAACTGCCGGGCTGGGTGGACAAGCTTTCGCTGGAGCAACGCTTCGAGTACCAGGGCAAGGGTCCGCTCGATC TCCCGGCCGTGCCTGTCACTGCGGAAGTCTCCGAGAAGGCGTTGTCGGAAGCGGGCCTAGCTTGGCATTCAGCAGCACCT GGGACCAATGCGCTGGTCTGCTCGACGCCCGAGCGGGCCATGCTGGAACTGTGCGACAGCGTGTCGGATGCGGCAGGGGT CTACGAGGCCGATGCGCTGATGCAGGCCATGACCACGCTGCGGCCGCAGCGGGTCGGCCTGCTGTTGCGCCACTGTCGCA GCATCAAGGCGAAGCGGCTGTTCCTGGCCCTGGCCGAGCGCCATCGGCATGCGTGGCTGTCGCACGTGCCCCTGGAGGGC GTTGATCTCGGCCGTGGCAAACGCGCGCTGGTGCCCGGCGGGCGCCTGCATCCGACCTATCAGATCACCTTGCCGGGAGA CCTCGATGAGCACTTGGCTTGA
Upstream 100 bases:
>100_bases TTGCTGGCATGGCGAAAAGATCACTCTGAGTGATTCTTTGTGGCCCTTGTCAAACTGGCCTATCTTGGTGAAGGTTTATA AATCTGTTATTTTGAGCACT
Downstream 100 bases:
>100_bases CCATTGGGACGGGCGCTACACGGACAGGGTGCGGCTGCTGGTCGAGATCCTGCCGGTGCTGGCGCAGGAGCCGCGCTTCG CGCTCAAGGGAGGTACGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA
Sequences:
>Translated_273_residues MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA >Mature_273_residues MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGRLQWDGVVRSLQVGEGMPLHV GGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSLEQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAP GTNALVCSTPERAMLELCDSVSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29783; Mature: 29783
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGR CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCEEECCCCE LQWDGVVRSLQVGEGMPLHVGGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSL EEHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCHHCCCHHHHHHH EQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAPGTNALVCSTPERAMLELCDS HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHH VSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA CCCCCCCEEECCCCCCCCEEEEEECCCCHHHCC >Mature Secondary Structure MDAQNSGKLNRLLAELGDTHLVSSRWLRAHGYSNSLVARYVGSGWLVSPARGVYMRRGGR CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEECCCCCEEECCCCE LQWDGVVRSLQVGEGMPLHVGGRFALGLQGHEHYLRLGDAGTITLYGPQQLPGWVDKLSL EEHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEECCCCEEEEECCHHCCCHHHHHHH EQRFEYQGKGPLDLPAVPVTAEVSEKALSEAGLAWHSAAPGTNALVCSTPERAMLELCDS HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHH VSDAAGVYEADALMQAMTTLRPQRVGLLLRHCRSIKAKRLFLALAERHRHAWLSHVPLEG HHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VDLGRGKRALVPGGRLHPTYQITLPGDLDEHLA CCCCCCCEEECCCCCCCCEEEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA