Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612017
Identifier: 120612017
GI number: 120612017
Start: 3719339
End: 3719581
Strand: Reverse
Name: 120612017
Synonym: Aave_3363
Alternate gene names: NA
Gene position: 3719581-3719339 (Counterclockwise)
Preceding gene: 120612018
Following gene: 120612015
Centisome position: 69.49
GC content: 66.26
Gene sequence:
>243_bases ATGGTTCACGATTTCACACTGGTCTATGCACTGGGCTCGGGCATGGGGTCGCAGGAGGATGTCCTTCGCCAAGTGGCGGG CAGCGACTGCGCCGATGCCACGGGCGGCTGGGGACGGCCAGGTCATGTCGGTCTGGCTTTCAGCAGGGAGGCGAGCGACC GCGATGCTGCGGTCACGCTTGCAACGGCGCAGCTGGCACAAGCGCTGCCCGGGGCTGTGCTGATCCGAGTGGATACCGCG TAG
Upstream 100 bases:
>100_bases TGGCTCAGCGCACGGAGGCCAAGAGCGCGGCAGATCGCCAGCAGCTTGACGAGACGCTGGCGCGGATCGCCGGTGCCAGA TAACGAAGGAAGCTGACGCG
Downstream 100 bases:
>100_bases CCGCTGTAGGCATTTGATGGTGACTTCATCATCGAACAGGGCGGTGCCGGCGCAGCCTCACGTCCGGTCCGCTGGACGAG TTGGTCTTCGCTGATCGAGA
Product: prophage CP4-57 regulatory
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MVHDFTLVYALGSGMGSQEDVLRQVAGSDCADATGGWGRPGHVGLAFSREASDRDAAVTLATAQLAQALPGAVLIRVDTA
Sequences:
>Translated_80_residues MVHDFTLVYALGSGMGSQEDVLRQVAGSDCADATGGWGRPGHVGLAFSREASDRDAAVTLATAQLAQALPGAVLIRVDTA >Mature_80_residues MVHDFTLVYALGSGMGSQEDVLRQVAGSDCADATGGWGRPGHVGLAFSREASDRDAAVTLATAQLAQALPGAVLIRVDTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8171; Mature: 8171
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHDFTLVYALGSGMGSQEDVLRQVAGSDCADATGGWGRPGHVGLAFSREASDRDAAVTL CCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHH ATAQLAQALPGAVLIRVDTA HHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MVHDFTLVYALGSGMGSQEDVLRQVAGSDCADATGGWGRPGHVGLAFSREASDRDAAVTL CCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEHH ATAQLAQALPGAVLIRVDTA HHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA