Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612015
Identifier: 120612015
GI number: 120612015
Start: 3717926
End: 3718249
Strand: Reverse
Name: 120612015
Synonym: Aave_3361
Alternate gene names: NA
Gene position: 3718249-3717926 (Counterclockwise)
Preceding gene: 120612017
Following gene: 120612014
Centisome position: 69.46
GC content: 54.32
Gene sequence:
>324_bases ATGAAACGGTGCATCGTCGGCATTCAACGACCAGATGGCGCGCATCCTCATCGACCAAGGGACGAAACGCCGCAGATTTG GTTCAGTTCGTTGGCGTCTCTTGCTGCCGTGCTCTCAGATGACAACCGACGCTTGCTGCGCCTAATTCACGAGAAGCAGC CGAAGTCACTAACAGAATTGGCGGAGCTCAGCGGTCGAAAGGTTCCAAATTTGTCCCGTACCTTGCGTCTGATGGCGGAT TACGGTCTGGTCTCGTTGCAGCGCAATGTCAGAGATGTCCAACCGACTGCACTGGCGACTGAATTCATGGTCGTGTTGGA TTGA
Upstream 100 bases:
>100_bases CAAGTGAAGCCTGGCGAGGGCAGGGCAGGGGGATTCTTGAAGTCGACGATGATTATCACATACTGATACAATGAACTGGA CGCATATCTCGGGACTCATC
Downstream 100 bases:
>100_bases TGGGGGTGAATATTAGAGGGAACACGATGACCAGAATGTGGATGGTGCGCGGTGAAGGCGGCAGCCTGTACGACGCTTTT CGGGAACGCGGCGTAGCTGC
Product: regulatory protein, MarR
Products: NA
Alternate protein names: Regulatory Protein MarR; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKRCIVGIQRPDGAHPHRPRDETPQIWFSSLASLAAVLSDDNRRLLRLIHEKQPKSLTELAELSGRKVPNLSRTLRLMAD YGLVSLQRNVRDVQPTALATEFMVVLD
Sequences:
>Translated_107_residues MKRCIVGIQRPDGAHPHRPRDETPQIWFSSLASLAAVLSDDNRRLLRLIHEKQPKSLTELAELSGRKVPNLSRTLRLMAD YGLVSLQRNVRDVQPTALATEFMVVLD >Mature_107_residues MKRCIVGIQRPDGAHPHRPRDETPQIWFSSLASLAAVLSDDNRRLLRLIHEKQPKSLTELAELSGRKVPNLSRTLRLMAD YGLVSLQRNVRDVQPTALATEFMVVLD
Specific function: Unknown
COG id: COG4190
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12126; Mature: 12126
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCIVGIQRPDGAHPHRPRDETPQIWFSSLASLAAVLSDDNRRLLRLIHEKQPKSLTEL CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH AELSGRKVPNLSRTLRLMADYGLVSLQRNVRDVQPTALATEFMVVLD HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEC >Mature Secondary Structure MKRCIVGIQRPDGAHPHRPRDETPQIWFSSLASLAAVLSDDNRRLLRLIHEKQPKSLTEL CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH AELSGRKVPNLSRTLRLMADYGLVSLQRNVRDVQPTALATEFMVVLD HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA