Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612000
Identifier: 120612000
GI number: 120612000
Start: 3699834
End: 3700331
Strand: Reverse
Name: 120612000
Synonym: Aave_3346
Alternate gene names: NA
Gene position: 3700331-3699834 (Counterclockwise)
Preceding gene: 120612001
Following gene: 120611999
Centisome position: 69.13
GC content: 64.66
Gene sequence:
>498_bases TTGGCCGCGGAACGACCCATGCAGTACCACATCCAGGAAGCCACCTTCGACCTGCCCGAGGGCAGCTTCATCGACCGCAG CGTGAACGTGCTGGTCTTCGGCGATCCCGCGCTGCCTTTCAGCGTGGTTATCACGCGAGACTACTTCGACGAGGGTGGAA GCGTCGAACAACTGCTGCGCGAGCAGGTCAAGGCGTTGTCCACGTCGGGCAAGCAGTTCAAGGAGCTGGAGTTCGGCACG ACCCACCTGCCTTTGAATGCGCCAGCGGGTACGCAGCCAACATCGGCATCTGCATCCGCCGCTGGTGGAGCGCCCAATGC TGCGGGCGCCTACGTTACTTACACGAAGCAGGGCCATCCGATCCACCAGAAGATCGTGCTCGCGGAGATGCCCGGGCGTC GCGCACTGGTCGTGACCGGCACTTACGCCGGTCCCTGGAAGGAGGAGCACGTCGCCCACTGGGCCTCGGTCCTGCACACG CTGCGCCTGCGCGCGTGA
Upstream 100 bases:
>100_bases GGCAAGGTGGAGATCCGCGGAAAGAACGGGCTCATCGAGCTCAAGGACGTGCTCACCGTGCTGGGCAAGCCCGTCAACAT CAACTGACCCTCTCGCGGCC
Downstream 100 bases:
>100_bases GGCCGCCGGTCTATATCTCATCTCACATCAGCTTTAGACGCACCACGTCATGCCCAAGGCCGCCCGACTGCACGATCCGA TCGCCCATACCTATGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAAERPMQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGT THLPLNAPAGTQPTSASASAAGGAPNAAGAYVTYTKQGHPIHQKIVLAEMPGRRALVVTGTYAGPWKEEHVAHWASVLHT LRLRA
Sequences:
>Translated_165_residues MAAERPMQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGT THLPLNAPAGTQPTSASASAAGGAPNAAGAYVTYTKQGHPIHQKIVLAEMPGRRALVVTGTYAGPWKEEHVAHWASVLHT LRLRA >Mature_164_residues AAERPMQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLREQVKALSTSGKQFKELEFGTT HLPLNAPAGTQPTSASASAAGGAPNAAGAYVTYTKQGHPIHQKIVLAEMPGRRALVVTGTYAGPWKEEHVAHWASVLHTL RLRA
Specific function: Unknown
COG id: COG5435
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17854; Mature: 17723
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAERPMQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLR CCCCCCHHEEEEHHEEECCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHH EQVKALSTSGKQFKELEFGTTHLPLNAPAGTQPTSASASAAGGAPNAAGAYVTYTKQGHP HHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC IHQKIVLAEMPGRRALVVTGTYAGPWKEEHVAHWASVLHTLRLRA HHHEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAERPMQYHIQEATFDLPEGSFIDRSVNVLVFGDPALPFSVVITRDYFDEGGSVEQLLR CCCCCHHEEEEHHEEECCCCCEECCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHH EQVKALSTSGKQFKELEFGTTHLPLNAPAGTQPTSASASAAGGAPNAAGAYVTYTKQGHP HHHHHHHCCCCHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC IHQKIVLAEMPGRRALVVTGTYAGPWKEEHVAHWASVLHTLRLRA HHHEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA