Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611989
Identifier: 120611989
GI number: 120611989
Start: 3685899
End: 3686915
Strand: Direct
Name: 120611989
Synonym: Aave_3334
Alternate gene names: NA
Gene position: 3685899-3686915 (Clockwise)
Preceding gene: 120611988
Following gene: 120611990
Centisome position: 68.86
GC content: 64.7
Gene sequence:
>1017_bases ATGAAAAATCTGCAGGAGGCCACCGAGCGCATCTGCGAACTCAAGGGGAGCCTGATCGCATTGGACGCGTTGCTTCCGTC GGTCGTGGATGCATTGCCATCCACCGCCCTCGGCATGTTGGCGCGGTCGTTCGAAGCGCGTGCCGAAGCTGCACGGACCG TCATTCTGAACACCCCTGTTTCGGACCACGTGCTGGCCGCATTCGAACGGGACATTGCCAGAACGCATGCCATGCTTGCG TCGGCCGCGACGACCGCGGCCAGCATTCCGCCGCGCCAGGCCGTCGAAGCCATTCTTCTGGCCACGACCTACGTCCGCAC ATACGCCGGAACCCGGTTGCTGACGGGCGCCAGCGGCTTCTTCTTCCGCCGCGACGGCCTGCTGTTCCTGGTGACGAACC GGCATGTCTTTTCCGACGAGGCCAGCGGCCACTTCCCGGACCGCATCGAAATCGGATTCCATACCGACGCCAGCAATCTG ACCTCCTATGCCACCTTCTCGATACCGCTCTACGGTCACGGTATTGCGTTGTGGCGACAGGCTACCGACACGGGCGGGCC GGTGGACATTGCCGCCATAGAAATCCACACCGGCCGCCTGCCGGACAACGTGGTGCTGCATGCATTCGAGCCAACGCACC TCGACGCCGCAGGCGAGCAAGTGGCCATGGGAGACAACCTGGCGATCGTCGGATTTCCTCTGGGGTTCCACGACACCGTT CACCACCTCGCCGTGGCCCGCGGCGCATCGATCGCCTCGGCCTATGGCGTGCGCTTCCAGCAACAGGGCTGCTTTCTGAC CGACGCCAGGACGCACAGTGGCAGCAGCGGCGCGCCTGTCCTGCGGCGCAGGGGCGGAGGACGGGCAGACGGAGCCTCCC TGGCGAACTGGCAGTTGCTCGGAGTGCATTCCACGCGCATGGACATGCTCACCCGCGACCTGGCCAGGGACGAGTCGCTC GGACTCAATTGCGCCTGGTACGCGGATATCCTGATGCTTCTGACCCGGCCGGCTTAG
Upstream 100 bases:
>100_bases GGGCCAAGGGCCGTCCAGGCCCAGCCAACCTGCTCTCAGGCCATCCCACTCAAAAGCGCGGCTCGTCCGCGCTTTTTCTT TTCCGGAAGGCGTCGTTGCC
Downstream 100 bases:
>100_bases AAGAAAGGCCGGAAGGAGCGCCGGATCGGCGCCCCGCCTTGACACGTCGCCCGCAATGCAACATCATTAGTTACATGAAA CGCGACAGCCGCCTGTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKNLQEATERICELKGSLIALDALLPSVVDALPSTALGMLARSFEARAEAARTVILNTPVSDHVLAAFERDIARTHAMLA SAATTAASIPPRQAVEAILLATTYVRTYAGTRLLTGASGFFFRRDGLLFLVTNRHVFSDEASGHFPDRIEIGFHTDASNL TSYATFSIPLYGHGIALWRQATDTGGPVDIAAIEIHTGRLPDNVVLHAFEPTHLDAAGEQVAMGDNLAIVGFPLGFHDTV HHLAVARGASIASAYGVRFQQQGCFLTDARTHSGSSGAPVLRRRGGGRADGASLANWQLLGVHSTRMDMLTRDLARDESL GLNCAWYADILMLLTRPA
Sequences:
>Translated_338_residues MKNLQEATERICELKGSLIALDALLPSVVDALPSTALGMLARSFEARAEAARTVILNTPVSDHVLAAFERDIARTHAMLA SAATTAASIPPRQAVEAILLATTYVRTYAGTRLLTGASGFFFRRDGLLFLVTNRHVFSDEASGHFPDRIEIGFHTDASNL TSYATFSIPLYGHGIALWRQATDTGGPVDIAAIEIHTGRLPDNVVLHAFEPTHLDAAGEQVAMGDNLAIVGFPLGFHDTV HHLAVARGASIASAYGVRFQQQGCFLTDARTHSGSSGAPVLRRRGGGRADGASLANWQLLGVHSTRMDMLTRDLARDESL GLNCAWYADILMLLTRPA >Mature_338_residues MKNLQEATERICELKGSLIALDALLPSVVDALPSTALGMLARSFEARAEAARTVILNTPVSDHVLAAFERDIARTHAMLA SAATTAASIPPRQAVEAILLATTYVRTYAGTRLLTGASGFFFRRDGLLFLVTNRHVFSDEASGHFPDRIEIGFHTDASNL TSYATFSIPLYGHGIALWRQATDTGGPVDIAAIEIHTGRLPDNVVLHAFEPTHLDAAGEQVAMGDNLAIVGFPLGFHDTV HHLAVARGASIASAYGVRFQQQGCFLTDARTHSGSSGAPVLRRRGGGRADGASLANWQLLGVHSTRMDMLTRDLARDESL GLNCAWYADILMLLTRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36239; Mature: 36239
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLQEATERICELKGSLIALDALLPSVVDALPSTALGMLARSFEARAEAARTVILNTPV CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEECCC SDHVLAAFERDIARTHAMLASAATTAASIPPRQAVEAILLATTYVRTYAGTRLLTGASGF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC FFRRDGLLFLVTNRHVFSDEASGHFPDRIEIGFHTDASNLTSYATFSIPLYGHGIALWRQ EEEECCEEEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCEEEEEE ATDTGGPVDIAAIEIHTGRLPDNVVLHAFEPTHLDAAGEQVAMGDNLAIVGFPLGFHDTV CCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEEECCCHHHHH HHLAVARGASIASAYGVRFQQQGCFLTDARTHSGSSGAPVLRRRGGGRADGASLANWQLL HHHHHHCCCHHHHHHCCEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEE GVHSTRMDMLTRDLARDESLGLNCAWYADILMLLTRPA EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKNLQEATERICELKGSLIALDALLPSVVDALPSTALGMLARSFEARAEAARTVILNTPV CCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEECCC SDHVLAAFERDIARTHAMLASAATTAASIPPRQAVEAILLATTYVRTYAGTRLLTGASGF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCC FFRRDGLLFLVTNRHVFSDEASGHFPDRIEIGFHTDASNLTSYATFSIPLYGHGIALWRQ EEEECCEEEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCEEEEEE ATDTGGPVDIAAIEIHTGRLPDNVVLHAFEPTHLDAAGEQVAMGDNLAIVGFPLGFHDTV CCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEECCCEEEEEECCCHHHHH HHLAVARGASIASAYGVRFQQQGCFLTDARTHSGSSGAPVLRRRGGGRADGASLANWQLL HHHHHHCCCHHHHHHCCEEECCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEE GVHSTRMDMLTRDLARDESLGLNCAWYADILMLLTRPA EECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA