| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611922
Identifier: 120611922
GI number: 120611922
Start: 3609770
End: 3610279
Strand: Direct
Name: 120611922
Synonym: Aave_3265
Alternate gene names: NA
Gene position: 3609770-3610279 (Clockwise)
Preceding gene: 120611921
Following gene: 120611924
Centisome position: 67.44
GC content: 44.31
Gene sequence:
>510_bases TTGCCCGAACATATTGATCGACAGGAATTGCTGAAAATCCGGAAGGCAATGGTCATTGGACTCCCTTCGATAGTTTTTGT GATTTTTCTCTGTTGCTTTTTTGTTTTGCCGGAAGTTTTCAGATCGATAAACGATCTACTGAATGACTCTCCTGTTGTCA GAATCTCTGTAGCTGGATCTTCCGTTTTTTTTGCACTTCCATTGGCTTTGATCATGCTTGTGCTTGCCGCATCAAAAGCA ATCCCTATAAAATGGAATGGAGCCGACTTCTTTGTCAGATTACTTAACATCAATATCTTTGTAGCTGGTGCGTTTATGGT AATTGGAATGCCCGCATTGACCTTGGCACAATACCATTACCTGCCCACGCTTGGCTACTCAAAATGCAATGAGCTCAGGG GACACCCTACCATGTGGTTCAACGACTGGGTGAAGAATCCTGAATGGTGCGTGCATGGAAAAGATAGAGCCTGGGTCATG GAGCAGGCACAAAAGGGAACCTCTCAATGA
Upstream 100 bases:
>100_bases GTCGTGGCTGAACAAGATGCAAAGTCGCGTGCAAAGCAGCGCCCAGAAGACAGGTCAAGAGTTGGCGGATTGGCTCTGCC CCATATGTAGGAGATACTAA
Downstream 100 bases:
>100_bases TGTTGCCCCCGTATTCCCAGCCCCGTCCTATTCGCAATAAAGCGACTGTGACCTGCCCCCTGTAGCCATACCAATCATTG GGAGAGAGGTCCAGGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPEHIDRQELLKIRKAMVIGLPSIVFVIFLCCFFVLPEVFRSINDLLNDSPVVRISVAGSSVFFALPLALIMLVLAASKA IPIKWNGADFFVRLLNINIFVAGAFMVIGMPALTLAQYHYLPTLGYSKCNELRGHPTMWFNDWVKNPEWCVHGKDRAWVM EQAQKGTSQ
Sequences:
>Translated_169_residues MPEHIDRQELLKIRKAMVIGLPSIVFVIFLCCFFVLPEVFRSINDLLNDSPVVRISVAGSSVFFALPLALIMLVLAASKA IPIKWNGADFFVRLLNINIFVAGAFMVIGMPALTLAQYHYLPTLGYSKCNELRGHPTMWFNDWVKNPEWCVHGKDRAWVM EQAQKGTSQ >Mature_168_residues PEHIDRQELLKIRKAMVIGLPSIVFVIFLCCFFVLPEVFRSINDLLNDSPVVRISVAGSSVFFALPLALIMLVLAASKAI PIKWNGADFFVRLLNINIFVAGAFMVIGMPALTLAQYHYLPTLGYSKCNELRGHPTMWFNDWVKNPEWCVHGKDRAWVME QAQKGTSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19097; Mature: 18966
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEHIDRQELLKIRKAMVIGLPSIVFVIFLCCFFVLPEVFRSINDLLNDSPVVRISVAGS CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC SVFFALPLALIMLVLAASKAIPIKWNGADFFVRLLNINIFVAGAFMVIGMPALTLAQYHY HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTLGYSKCNELRGHPTMWFNDWVKNPEWCVHGKDRAWVMEQAQKGTSQ CCCCCHHHHHHCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCC >Mature Secondary Structure PEHIDRQELLKIRKAMVIGLPSIVFVIFLCCFFVLPEVFRSINDLLNDSPVVRISVAGS CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC SVFFALPLALIMLVLAASKAIPIKWNGADFFVRLLNINIFVAGAFMVIGMPALTLAQYHY HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTLGYSKCNELRGHPTMWFNDWVKNPEWCVHGKDRAWVMEQAQKGTSQ CCCCCHHHHHHCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA