Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611885
Identifier: 120611885
GI number: 120611885
Start: 3557959
End: 3558546
Strand: Reverse
Name: 120611885
Synonym: Aave_3227
Alternate gene names: NA
Gene position: 3558546-3557959 (Counterclockwise)
Preceding gene: 120611886
Following gene: 120611884
Centisome position: 66.48
GC content: 72.45
Gene sequence:
>588_bases GTGAAACCCTCTCCTTTCTTCCATGACCTGCGCTCGGCCTACCAGGCCGAGCTCGACGACCTCGCCCAGGACTCCGAGGG CAAGGACGTGCTGCGCAAGCGCCTCGCCCAGAAGCGCGGCGAGATCGCCTTCCTGGCCAAGATGATCGATTTCAGCCCCG AGATGGTGGCGGTGGCCTTCCACCAGGGCTTCCGCTTCCACCGGCCGGCCACGCTCGATCCGCTGCTGGGGCGGGGCGGG GTGTCCGACCTGCCGGAATGGTCCGCGCTGGGCGGGGCGGCGACGCTCGAGCCCTGGGCCCAGCCGCTGGCGGACGTGGT GCTGGCCGAACCGTCGGGCGCGCGCTTCCTGTCCCTGGCTGCGCTGCTCGAATACCAGCGGCAGCACGCGCGCTTCGCCG GCCAGGGCGCCGACAGCGCCGGGGCCGGCGAAGGCGACGATGACGAGGGCGGAGACGAGGCGGAGCAGGGCGATGACGAC GAGGCCCGCTGGAGCGCCGACGACGCCGGCGAGCCCCGCAGCCATGCCGACCGCGAGGAGGCCGCCGCCGACTGGATGGC CGACCTCGGATTCGACCGCAAGGAGTAA
Upstream 100 bases:
>100_bases GCCAGGCCTACGACGACAACCGCCGCCGCAACCTGCTCGACGATCCGCTCCAGACGGCGCGGGAGATCTGGCAGTCCTAT TTCAAGAACGTGCTTTCCTC
Downstream 100 bases:
>100_bases TCGCCATGTCACGACATCTCGCACTCATCACCCAGACCCAGGCCCTGATCGCCGCCGGCGACATCGTGGGCGCCGAGTCC GCCCTGTCCCGGCTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKPSPFFHDLRSAYQAELDDLAQDSEGKDVLRKRLAQKRGEIAFLAKMIDFSPEMVAVAFHQGFRFHRPATLDPLLGRGG VSDLPEWSALGGAATLEPWAQPLADVVLAEPSGARFLSLAALLEYQRQHARFAGQGADSAGAGEGDDDEGGDEAEQGDDD EARWSADDAGEPRSHADREEAAADWMADLGFDRKE
Sequences:
>Translated_195_residues MKPSPFFHDLRSAYQAELDDLAQDSEGKDVLRKRLAQKRGEIAFLAKMIDFSPEMVAVAFHQGFRFHRPATLDPLLGRGG VSDLPEWSALGGAATLEPWAQPLADVVLAEPSGARFLSLAALLEYQRQHARFAGQGADSAGAGEGDDDEGGDEAEQGDDD EARWSADDAGEPRSHADREEAAADWMADLGFDRKE >Mature_195_residues MKPSPFFHDLRSAYQAELDDLAQDSEGKDVLRKRLAQKRGEIAFLAKMIDFSPEMVAVAFHQGFRFHRPATLDPLLGRGG VSDLPEWSALGGAATLEPWAQPLADVVLAEPSGARFLSLAALLEYQRQHARFAGQGADSAGAGEGDDDEGGDEAEQGDDD EARWSADDAGEPRSHADREEAAADWMADLGFDRKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21183; Mature: 21183
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSPFFHDLRSAYQAELDDLAQDSEGKDVLRKRLAQKRGEIAFLAKMIDFSPEMVAVAF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH HQGFRFHRPATLDPLLGRGGVSDLPEWSALGGAATLEPWAQPLADVVLAEPSGARFLSLA HHCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH ALLEYQRQHARFAGQGADSAGAGEGDDDEGGDEAEQGDDDEARWSADDAGEPRSHADREE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAADWMADLGFDRKE HHHHHHHHCCCCCCC >Mature Secondary Structure MKPSPFFHDLRSAYQAELDDLAQDSEGKDVLRKRLAQKRGEIAFLAKMIDFSPEMVAVAF CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH HQGFRFHRPATLDPLLGRGGVSDLPEWSALGGAATLEPWAQPLADVVLAEPSGARFLSLA HHCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH ALLEYQRQHARFAGQGADSAGAGEGDDDEGGDEAEQGDDDEARWSADDAGEPRSHADREE HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AAADWMADLGFDRKE HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA