| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611357
Identifier: 120611357
GI number: 120611357
Start: 2958002
End: 2958730
Strand: Direct
Name: 120611357
Synonym: Aave_2689
Alternate gene names: NA
Gene position: 2958002-2958730 (Clockwise)
Preceding gene: 120611356
Following gene: 120611359
Centisome position: 55.26
GC content: 60.91
Gene sequence:
>729_bases ATGCAAACTGCACAACAGCAACCCCGTGAGTTTTTCAACCTGCACACCAGCGGTATCGGTTACCTCAACCGTATTCGCTG GGTGGAAACCAAAGGTCGTGGACGTAAGGCGGAATCGTTCCTCGCGTGCAGTATTTCTGCATTGCGTGGCTCTTCGGATG CTGCCGACTACACGTATTTCGATCTTCGGGTCAGCGGTGAGGAAGCGATTGGATTGATCGACGGTCTCCAGCAAGAAGTG CACGATCGCTGCAAGGTGCTCGTGAGCTTCAAGATCGGCGACATCTATCCGCATCTTTACGAGCGTGACGTGCGTGACCA GCAGTCCGGACGTCCCACGGGACATAAGGAAATGGCCACGCTCATCAAGGGCCGGCTCATCCTGATCAACTCCATTTCGG TGGACGGCGAGAAGGTGTACAGCAGGCCCTCTGACGAAAGCTCGGGCCATGAAGGTGAACAGTCGCAGGGCGACGATCAC CCGATGGACGGCGACGCTTCCGACTCCACGCAATTCGAGCGCTCCGCGCGCGAAGAGATGGAGCAGGAAGCGCCTCCCCC GCGTCGTTCGGTCGCACCGCAACCGCGGACGACCGTTACGCCGATGCCGCAGCGCCGCAACCGCGGGCTGAAGCACCGGC GCCGCAACGTCGGCAGCCTCTTCGCTCCATCGCGAGCGGCAGGCAACCACGTGCTGAGCACCGCGAACCCGCGGAAGCCT GAGCACTGA
Upstream 100 bases:
>100_bases GTAACCCGGATGGGGACACAGCCGCCCCATCCGAGCCTTACGGCCCGGTTGAGTGCGTCTGCGCTCCTCGTCCATTCTTT TGGAACTTTGGAGCAACACC
Downstream 100 bases:
>100_bases TGTGAGAACCCCGGACCGCTTGCGGTCCCGGGGGTATCATCAAATCCAAAGGAGAGATTTCATGTCGCTAGAATCAACCC TGGCGGGCTGGGTCGATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MQTAQQQPREFFNLHTSGIGYLNRIRWVETKGRGRKAESFLACSISALRGSSDAADYTYFDLRVSGEEAIGLIDGLQQEV HDRCKVLVSFKIGDIYPHLYERDVRDQQSGRPTGHKEMATLIKGRLILINSISVDGEKVYSRPSDESSGHEGEQSQGDDH PMDGDASDSTQFERSAREEMEQEAPPPRRSVAPQPRTTVTPMPQRRNRGLKHRRRNVGSLFAPSRAAGNHVLSTANPRKP EH
Sequences:
>Translated_242_residues MQTAQQQPREFFNLHTSGIGYLNRIRWVETKGRGRKAESFLACSISALRGSSDAADYTYFDLRVSGEEAIGLIDGLQQEV HDRCKVLVSFKIGDIYPHLYERDVRDQQSGRPTGHKEMATLIKGRLILINSISVDGEKVYSRPSDESSGHEGEQSQGDDH PMDGDASDSTQFERSAREEMEQEAPPPRRSVAPQPRTTVTPMPQRRNRGLKHRRRNVGSLFAPSRAAGNHVLSTANPRKP EH >Mature_242_residues MQTAQQQPREFFNLHTSGIGYLNRIRWVETKGRGRKAESFLACSISALRGSSDAADYTYFDLRVSGEEAIGLIDGLQQEV HDRCKVLVSFKIGDIYPHLYERDVRDQQSGRPTGHKEMATLIKGRLILINSISVDGEKVYSRPSDESSGHEGEQSQGDDH PMDGDASDSTQFERSAREEMEQEAPPPRRSVAPQPRTTVTPMPQRRNRGLKHRRRNVGSLFAPSRAAGNHVLSTANPRKP EH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27150; Mature: 27150
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAQQQPREFFNLHTSGIGYLNRIRWVETKGRGRKAESFLACSISALRGSSDAADYTYF CCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE DLRVSGEEAIGLIDGLQQEVHDRCKVLVSFKIGDIYPHLYERDVRDQQSGRPTGHKEMAT EEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHH LIKGRLILINSISVDGEKVYSRPSDESSGHEGEQSQGDDHPMDGDASDSTQFERSAREEM HHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EQEAPPPRRSVAPQPRTTVTPMPQRRNRGLKHRRRNVGSLFAPSRAAGNHVLSTANPRKP HHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC EH CC >Mature Secondary Structure MQTAQQQPREFFNLHTSGIGYLNRIRWVETKGRGRKAESFLACSISALRGSSDAADYTYF CCCHHHHHHHHHHHHCCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE DLRVSGEEAIGLIDGLQQEVHDRCKVLVSFKIGDIYPHLYERDVRDQQSGRPTGHKEMAT EEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHH LIKGRLILINSISVDGEKVYSRPSDESSGHEGEQSQGDDHPMDGDASDSTQFERSAREEM HHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH EQEAPPPRRSVAPQPRTTVTPMPQRRNRGLKHRRRNVGSLFAPSRAAGNHVLSTANPRKP HHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC EH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA