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The map label for this gene is 120611352

Identifier: 120611352

GI number: 120611352

Start: 2952198

End: 2952596

Strand: Direct

Name: 120611352

Synonym: Aave_2684

Alternate gene names: NA

Gene position: 2952198-2952596 (Clockwise)

Preceding gene: 120611351

Following gene: 120611353

Centisome position: 55.15

GC content: 64.66

Gene sequence:

>399_bases
ATGCAGAACCTATTCATCGGCAAGGGCAATCTGGCCAACTCGCCCGAGCTTCGACAAATCACGGGCAGGAACGGCGACTT
CGAGGTGGCTTCGATGCGCGTGTACTTCGGTCGGTATGGGCAGACGGAAGACGGCGAGGTGGGGCAGGTCGGCGGCTTCT
GGCGCGAAGTCGAGATCTACGGCCAGAAGGCCCGCGACGTCGCTCGCCACCTGCGACGGGGCGCCCGCGTCCTGGTCATC
GGCGAAGAGCGGGAGTTCACTGCCCGTGGCGACAACGGCGAGGTAGAGGTCATCAAGGTAGTGGCCGAGGACGTGGCACT
CCAGCTCACGCGCATCGAGCAGATCGTGTTCAAGGCACGGCGCGATGCGACGGAGCCGGAAGGTGAGGTTCCTGCCTGA

Upstream 100 bases:

>100_bases
TTCATGTTTCCGAGATCACCGATCTCGGTGTAGGTCTCATCGCGAGTACGGACCTGGTGCAGCCATACCCGCGAATCTCA
ACGCACCGTGGAGCAATGCA

Downstream 100 bases:

>100_bases
GGGGCGTCCTGCGTCAGAACACCGAGCCCCAACGCATCAGCGTTGGGCATCTGAACATCCACTGGAGCAAGTGATGAGTG
AGCAAGATTTCCAACAGCGG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQNLFIGKGNLANSPELRQITGRNGDFEVASMRVYFGRYGQTEDGEVGQVGGFWREVEIYGQKARDVARHLRRGARVLVI
GEEREFTARGDNGEVEVIKVVAEDVALQLTRIEQIVFKARRDATEPEGEVPA

Sequences:

>Translated_132_residues
MQNLFIGKGNLANSPELRQITGRNGDFEVASMRVYFGRYGQTEDGEVGQVGGFWREVEIYGQKARDVARHLRRGARVLVI
GEEREFTARGDNGEVEVIKVVAEDVALQLTRIEQIVFKARRDATEPEGEVPA
>Mature_132_residues
MQNLFIGKGNLANSPELRQITGRNGDFEVASMRVYFGRYGQTEDGEVGQVGGFWREVEIYGQKARDVARHLRRGARVLVI
GEEREFTARGDNGEVEVIKVVAEDVALQLTRIEQIVFKARRDATEPEGEVPA

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14793; Mature: 14793

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50935 SSB ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLFIGKGNLANSPELRQITGRNGDFEVASMRVYFGRYGQTEDGEVGQVGGFWREVEIY
CCCEEECCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHEEC
GQKARDVARHLRRGARVLVIGEEREFTARGDNGEVEVIKVVAEDVALQLTRIEQIVFKAR
CCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
RDATEPEGEVPA
CCCCCCCCCCCC
>Mature Secondary Structure
MQNLFIGKGNLANSPELRQITGRNGDFEVASMRVYFGRYGQTEDGEVGQVGGFWREVEIY
CCCEEECCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHEEC
GQKARDVARHLRRGARVLVIGEEREFTARGDNGEVEVIKVVAEDVALQLTRIEQIVFKAR
CCHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHH
RDATEPEGEVPA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA