| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611350
Identifier: 120611350
GI number: 120611350
Start: 2950448
End: 2951575
Strand: Direct
Name: 120611350
Synonym: Aave_2682
Alternate gene names: NA
Gene position: 2950448-2951575 (Clockwise)
Preceding gene: 120611349
Following gene: 120611351
Centisome position: 55.12
GC content: 63.3
Gene sequence:
>1128_bases ATGGCAACGGCAAAGAAATCCGCCACGGATAGCGCGCCCAACTTCGCTCCCGAAGGCTTGGCCGCGTTACTGAAACCCAC GCTGGCATTCGAAAAGGAGCCCGACTCTCCATTTTCTGACGGCTATTCGATCCGCCTCGAAGAGAAGGTGCTGGCCGAGT ACATCGCGGCTGGGGCATCGCCGGACGACCCTCTGTTCGACCGGTACGCCGAACTCGAGGACCGTCGGGAGCGGCTGCAG CAGATGCAGAGCGAGCGAGATGCCCAGCGCGGTGCAGACGTTGTGGCCACCCGATCGGAAGCCGCGGGCCTTGACGCCAT CGGTGGTCTGGTAGATGACGGGCTGGACCAGATGACGATCCACACGATTGAGGCGTACCGGATGTTCCTCGGTCGTAGCA GGGATGCCGCCAATCGCATCAATCCCATCATCGGCGGCAAGCGGGTCGCATCGTGCCTTCGCAACCTATGGATGCTGACG GGCAACGACAACCCGTACGCAGAGTGGGCGCTGCTGCGGCACGAGCACGGGGTCAACGAGGTCCACAAGCATCTCCAGGC CGAGATCGCCAAGGCCGAGGACATGCTGGATCAGCAGCGCAAGCGTGGGCTGGTGCTTGCCGTCCTTTCGTCGTCGAGTC CCATGACCGTGAATCTGGGTTTTCGCAGTCCGTATGGGTACGCCATCTCGATGCTGATGGTGGATTACGACCACTACGTG CGGCTGCAGAAGACGCTGCAGCGCAAAAACCTGCTCTCCGACGATGAGGTCCGCGGAAGCCTCCGGAAGGCTCAGCGGGC CATCCTGAACGTCTTCTATGGAACCGCGCGCTTCGATCGCTGGCTCAGCCGCCCGGAGATTCGTGCGCTGAACCGCGGCG ACTGGATCAGCAGTGCCGAGGATGCGGCAAAGCGCCTGCAGTTCGCGGTGTCGACCTTCGGGCCCGTTCCCGCGTCGGTC TACAAGGCCACCATCTCCCCGTCGCATTCCCGTCGGCGCTACTCGCTGACCGATGCCGAGCAGGCGGTGCTGAAGCAAGT CGGTGAGCAACTTGAGGCTGCTGAACAGGCCGAGCTCGAAGCTGGGGCAACGTCTGCCCCGGCCGAGGATGCCGCAGTGG CTTCCTGA
Upstream 100 bases:
>100_bases GGCTTGCTACCAGCCTGGAAATGAACACTCCGTCGCAGATGCGGCGCTGTCCTCGCCAAAGCCCACAACGCACTGATCGC AAAACACAAGGAGAACCATC
Downstream 100 bases:
>100_bases AGCATCGCGCATGAGCATGGAGCAGCGGTCATGAAAGGGGAGCGAATGAAAGGATCGGTGGAGAAAGGGTTGGCGAAGCC CATCGGATCCGAGCATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MATAKKSATDSAPNFAPEGLAALLKPTLAFEKEPDSPFSDGYSIRLEEKVLAEYIAAGASPDDPLFDRYAELEDRRERLQ QMQSERDAQRGADVVATRSEAAGLDAIGGLVDDGLDQMTIHTIEAYRMFLGRSRDAANRINPIIGGKRVASCLRNLWMLT GNDNPYAEWALLRHEHGVNEVHKHLQAEIAKAEDMLDQQRKRGLVLAVLSSSSPMTVNLGFRSPYGYAISMLMVDYDHYV RLQKTLQRKNLLSDDEVRGSLRKAQRAILNVFYGTARFDRWLSRPEIRALNRGDWISSAEDAAKRLQFAVSTFGPVPASV YKATISPSHSRRRYSLTDAEQAVLKQVGEQLEAAEQAELEAGATSAPAEDAAVAS
Sequences:
>Translated_375_residues MATAKKSATDSAPNFAPEGLAALLKPTLAFEKEPDSPFSDGYSIRLEEKVLAEYIAAGASPDDPLFDRYAELEDRRERLQ QMQSERDAQRGADVVATRSEAAGLDAIGGLVDDGLDQMTIHTIEAYRMFLGRSRDAANRINPIIGGKRVASCLRNLWMLT GNDNPYAEWALLRHEHGVNEVHKHLQAEIAKAEDMLDQQRKRGLVLAVLSSSSPMTVNLGFRSPYGYAISMLMVDYDHYV RLQKTLQRKNLLSDDEVRGSLRKAQRAILNVFYGTARFDRWLSRPEIRALNRGDWISSAEDAAKRLQFAVSTFGPVPASV YKATISPSHSRRRYSLTDAEQAVLKQVGEQLEAAEQAELEAGATSAPAEDAAVAS >Mature_374_residues ATAKKSATDSAPNFAPEGLAALLKPTLAFEKEPDSPFSDGYSIRLEEKVLAEYIAAGASPDDPLFDRYAELEDRRERLQQ MQSERDAQRGADVVATRSEAAGLDAIGGLVDDGLDQMTIHTIEAYRMFLGRSRDAANRINPIIGGKRVASCLRNLWMLTG NDNPYAEWALLRHEHGVNEVHKHLQAEIAKAEDMLDQQRKRGLVLAVLSSSSPMTVNLGFRSPYGYAISMLMVDYDHYVR LQKTLQRKNLLSDDEVRGSLRKAQRAILNVFYGTARFDRWLSRPEIRALNRGDWISSAEDAAKRLQFAVSTFGPVPASVY KATISPSHSRRRYSLTDAEQAVLKQVGEQLEAAEQAELEAGATSAPAEDAAVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41454; Mature: 41323
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAKKSATDSAPNFAPEGLAALLKPTLAFEKEPDSPFSDGYSIRLEEKVLAEYIAAGAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCC PDDPLFDRYAELEDRRERLQQMQSERDAQRGADVVATRSEAAGLDAIGGLVDDGLDQMTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCHHHHHHHHHCCCHHHHH HTIEAYRMFLGRSRDAANRINPIIGGKRVASCLRNLWMLTGNDNPYAEWALLRHEHGVNE HHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCHHH VHKHLQAEIAKAEDMLDQQRKRGLVLAVLSSSSPMTVNLGFRSPYGYAISMLMVDYDHYV HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH RLQKTLQRKNLLSDDEVRGSLRKAQRAILNVFYGTARFDRWLSRPEIRALNRGDWISSAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH DAAKRLQFAVSTFGPVPASVYKATISPSHSRRRYSLTDAEQAVLKQVGEQLEAAEQAELE HHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGATSAPAEDAAVAS CCCCCCCCCCCCCCC >Mature Secondary Structure ATAKKSATDSAPNFAPEGLAALLKPTLAFEKEPDSPFSDGYSIRLEEKVLAEYIAAGAS CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCC PDDPLFDRYAELEDRRERLQQMQSERDAQRGADVVATRSEAAGLDAIGGLVDDGLDQMTI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCHHHHHHHHHCCCHHHHH HTIEAYRMFLGRSRDAANRINPIIGGKRVASCLRNLWMLTGNDNPYAEWALLRHEHGVNE HHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCHHH VHKHLQAEIAKAEDMLDQQRKRGLVLAVLSSSSPMTVNLGFRSPYGYAISMLMVDYDHYV HHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH RLQKTLQRKNLLSDDEVRGSLRKAQRAILNVFYGTARFDRWLSRPEIRALNRGDWISSAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHH DAAKRLQFAVSTFGPVPASVYKATISPSHSRRRYSLTDAEQAVLKQVGEQLEAAEQAELE HHHHHHHHHHHHCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGATSAPAEDAAVAS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA